Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35345	Bat8	HLA-B associated transcript 8	17	17 18.87 cM	110147
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	BAT8[HLA-B associated transcript 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GCACTGCCCT (5) GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 60.3 0.0603 Cb medulloblastoma AGCTCAAAAA GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 110.9 0.1109 P8 GC+1d culture AGCTCAAAAA CTGCACCAAG GAGAGCCTGC (2) GATGTGACCA GCACTGCCCT (5) GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 60.4 0.0604 P8 GC+SHH+1d culture AAAACCCGGA AGCTCAAAAA CTGCACCAAG GAGAGCCTGC (2) GATGTGACCA GCACTGCCCT (5) GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 36.3 0.0363 3T3 fibroblasts CTGCACCAAG GAGAGCCTGC (2) GATGTGACCA GCACTGCCCT (5) GTAGTGGAGC (2) TAGTTGCTGG 66.5 0.0665 E15 cortex AGCTCAAAAA CATCTGGGGA (2) CTGCACCAAG TAGTTGCTGG 29.5 0.0295 P1 cortex CTGCACCAAG GATGTGACCA TAGTTGCTGG 18.1 0.0181 Hypothalamus CTGCACCAAG GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 119.6 0.1196 E12.5 retina CTGCACCAAG GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 28.2 0.0282 E14.5 retina AAAACCCGGA GAGAGCCTGC (2) GATCTGACCC GTAGTGGAGC (2) TAGTTGCTGG 105.6 0.1056 E16.5 retina AAAACCCGGA GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 59.7 0.0597 E18.5 retina GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 20 0.02 P0.5 retina CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 49.2 0.0492 P2.5 retina AAAACCCGGA CTGCACCAAG GATGTGACCA GTAGTGGAGC (2) TAGTTGCTGG 28.3 0.0283 P4.5 retina CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GTAGTGGAGC (2) GTGCCCAACC TAGTTGCTGG 27.8 0.0278 P6.5 retina CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 53.3 0.0533 P10.5 crx- retina CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 156.1 0.1561 P10.5 crx+ retina GATCTGACCC GATGTGACCA GTAGTGGAGC (2) TAGACACCTG (4) TAGTTGCTGG 90.3 0.0903 Adult retinal CTGCACCAAG GAGAGCCTGC (2) GATCTGACCC GATGTGACCA GTAGTGGAGC (2) GTGCCCAACC GTGGGGTGGC TAGTTGCTGG 76 0.076 ONL GATGTGACCA GTAGTGGAGC (2) GTGGGGTGGC TAGTTGCTGG 30.6 0.0306