Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38016	Srebf2	sterol regulatory element binding factor 2	15	15 E1 (15 48.5 cM)	20788
Gene Ontology	cholesterol metabolism | DNA binding | DNA binding | endoplasmic reticulum | Golgi apparatus | integral to membrane | lipid metabolism | nucleus | nucleus | protein binding | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	SREBF2[sterol regulatory element binding transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTCTCCTCA (3) TGCTGGACGT (2) 19.5 0.0195 Cb medulloblastoma GAGACCCTCA (2) GTGCTGAAGC (2) TGCTGGACGT (2) 20.8 0.0208 P8 GC+1d culture CTTCTCCTCA (3) GGCAGAGCTC (2) TGCTGGACGT (2) 58.2 0.0582 P8 GC+SHH+1d culture AGGGAGGAGG GGCAGAGCTC (2) GTGAATGTTT TGCTGGACGT (2) 55.1 0.0551 3T3 fibroblasts GCACACTGCA GGCAGAGCTC (2) GTGCTGAAGC (2) TGCTGGACGT (2) 17.5 0.0175 E15 cortex TGCTGGACGT (2) 9.9 0.0099 P1 cortex TGCTGGACGT (2) 9.1 0.0091 Hypothalamus GCACACTGCA TGCTGGACGT (2) 3.6 0.0036 E12.5 retina TGCTGGACGT (2) 18.8 0.0188 E14.5 retina AGGGAGGAGG GGCAGAGCTC (2) TGCTGGACGT (2) 16.4 0.0164 E16.5 retina CTTCTCCTCA (3) GTGAATGTTT GTGCTGAAGC (2) TGCTGGACGT (2) TGGGGAGCTT 30.7 0.0307 E18.5 retina GTGCTGAAGC (2) TGCTGGACGT (2) 23.6 0.0236 P0.5 retina AGGGAGGAGG GTGCTGAAGC (2) TGCTGGACGT (2) TGGGGAGCTT 17.7 0.0177 P2.5 retina GTGCTGAAGC (2) TGCTGGACGT (2) 26.4 0.0264 P4.5 retina GTGCTGAAGC (2) TGCTGGACGT (2) 13.9 0.0139 P6.5 retina GCACACTGCA GTGCTGAAGC (2) TGCTGGACGT (2) 15 0.015 P10.5 crx- retina GTGAATGTTT GTGCTGAAGC (2) TGCTGGACGT (2) 13.1 0.0131 P10.5 crx+ retina GGCAGAGCTC (2) GTGCTGAAGC (2) TGCTGGACGT (2) 7.6 0.0076 Adult retinal TGCTGGACGT (2) 3.7 0.0037 ONL GCACACTGCA TGCTGGACGT (2) 3.8 0.0038