Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38229
D530030D03Rik
RIKEN cDNA D530030D03 gene
1
78578
Mm.38229
E430023H19Rik
RIKEN cDNA E430023H19 gene
1
98417
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GTGGCTCAAA
(
13
)
9.8
0.0098
P8 Cb GC
ACCAGAGCAG
(
3
)
4.9
0.0049
P8 Cb GC
AGGAACTGTA (
19
)
1.6
0.0016
P8 Cb GC
TTTCCTTAGG
(
5
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GTGGCTCAAA
(
13
)
6.9
0.0069
Cb medulloblastoma
TTTCCTTAGG
(
5
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GTGGCTCAAA
(
13
)
13.7
0.0137
P8 GC+1d culture
ACCAGAGCAG
(
3
)
6.8
0.0068
P8 GC+1d culture
TTTCCTTAGG
(
5
)
5.7
0.0057
P8 GC+1d culture
CACAAGGGAA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
ACCAGAGCAG
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GTGGCTCAAA
(
13
)
7
0.007
P8 GC+SHH+1d culture
TTTCCTTAGG
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGCATCTCT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGCTCAAAA (
2
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
ACCAGAGCAG
(
3
)
17.5
0.0175
3T3 fibroblasts
CACAAGGGAA (
5
)
14
0.014
3T3 fibroblasts
GTGGCTCAAA
(
13
)
10.5
0.0105
3T3 fibroblasts
GCCAAGGCAA (
9
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GTGGCTCAAA
(
13
)
19.8
0.0198
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GTGGCTCAAA
(
13
)
18.2
0.0182
P1 cortex
TTTCCTTAGG
(
5
)
9.1
0.0091
P1 cortex
ACCAGAGCAG
(
3
)
4.5
0.0045
P1 cortex
AGGAACTGTA (
19
)
4.5
0.0045
P1 cortex
CACAAGGGAA (
5
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GTGGCTCAAA
(
13
)
5.4
0.0054
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GTGGCTCAAA
(
13
)
11.3
0.0113
E12.5 retina
ACCAGAGCAG
(
3
)
5.6
0.0056
E12.5 retina
TTTCCTTAGG
(
5
)
3.8
0.0038
E12.5 retina
AGGAACTGTA (
19
)
1.9
0.0019
E12.5 retina
CACAAGGGAA (
5
)
1.9
0.0019
E12.5 retina
TGGCATCTCT
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GTGGCTCAAA
(
13
)
18.2
0.0182
E14.5 retina
ACCAGAGCAG
(
3
)
10.9
0.0109
E14.5 retina
AGGAACTGTA (
19
)
1.8
0.0018
E14.5 retina
TGGCATCTCT
(
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GTGGCTCAAA
(
13
)
9.1
0.0091
E16.5 retina
ACCAGAGCAG
(
3
)
7.2
0.0072
E16.5 retina
TTTCCTTAGG
(
5
)
7.2
0.0072
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
ACCAGAGCAG
(
3
)
5.5
0.0055
E18.5 retina
GTGGCTCAAA
(
13
)
5.5
0.0055
E18.5 retina
AGGAACTGTA (
19
)
1.8
0.0018
E18.5 retina
GCCAAGGCAA (
9
)
1.8
0.0018
E18.5 retina
TGGCATCTCT
(
3
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GTGGCTCAAA
(
13
)
17.7
0.0177
P0.5 retina
ACCAGAGCAG
(
3
)
5.9
0.0059
P0.5 retina
TTTCCTTAGG
(
5
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
ACCAGAGCAG
(
3
)
10.6
0.0106
P2.5 retina
GTGGCTCAAA
(
13
)
10.6
0.0106
P2.5 retina
AGGAACTGTA (
19
)
3.5
0.0035
P2.5 retina
TTTCCTTAGG
(
5
)
3.5
0.0035
P2.5 retina
GCCAAGGCAA (
9
)
1.8
0.0018
P2.5 retina
TGGCATCTCT
(
3
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
ACCAGAGCAG
(
3
)
11.9
0.0119
P4.5 retina
GTGGCTCAAA
(
13
)
7.9
0.0079
P4.5 retina
TGGCATCTCT
(
3
)
4
0.004
P4.5 retina
TTTCCTTAGG
(
5
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GTGGCTCAAA
(
13
)
11.7
0.0117
P6.5 retina
TGGCATCTCT
(
3
)
3.3
0.0033
P6.5 retina
TTTCCTTAGG
(
5
)
3.3
0.0033
P6.5 retina
ACCAGAGCAG
(
3
)
1.7
0.0017
P6.5 retina
AGGAACTGTA (
19
)
1.7
0.0017
P6.5 retina
TTGCTCAAAA (
2
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TTTCCTTAGG
(
5
)
16.7
0.0167
P10.5 crx- retina
ACCAGAGCAG
(
3
)
5.6
0.0056
P10.5 crx- retina
GTGGCTCAAA
(
13
)
3.7
0.0037
P10.5 crx- retina
TGGCATCTCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GTGGCTCAAA
(
13
)
7.7
0.0077
P10.5 crx+ retina
ACCAGAGCAG
(
3
)
5.8
0.0058
P10.5 crx+ retina
AGGAACTGTA (
19
)
3.8
0.0038
P10.5 crx+ retina
TTGCTCAAAA (
2
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
ACCAGAGCAG
(
3
)
11.1
0.0111
Adult retinal
TTTCCTTAGG
(
5
)
7.4
0.0074
Adult retinal
CACAAGGGAA (
5
)
1.9
0.0019
Adult retinal
GCCAAGGCAA (
9
)
1.9
0.0019
Adult retinal
GTGGCTCAAA
(
13
)
1.9
0.0019
Adult retinal
TGGCATCTCT
(
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AGGAACTGTA (
19
)
11.5
0.0115
ONL
TTTCCTTAGG
(
5
)
9.6
0.0096
ONL
GTGGCTCAAA
(
13
)
5.7
0.0057
ONL
GCCAAGGCAA (
9
)
3.8
0.0038
ONL
ACCAGAGCAG
(
3
)
1.9
0.0019
ONL
TGGCATCTCT
(
3
)
1.9
0.0019
