Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38229
D530030D03Rik
RIKEN cDNA D530030D03 gene
1
78578
Mm.38229
E430023H19Rik
RIKEN cDNA E430023H19 gene
1
98417
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCTCAAA
(
2
)
9.8
0.0098
P8 Cb GC
ACCAGAGCAG
(
3
)
4.9
0.0049
P8 Cb GC
TTTCCTTAGG
(
4
)
1.6
0.0016
Cb medulloblastoma
GTGGCTCAAA
(
2
)
6.9
0.0069
Cb medulloblastoma
TTTCCTTAGG
(
4
)
2.3
0.0023
P8 GC+1d culture
GTGGCTCAAA
(
2
)
13.7
0.0137
P8 GC+1d culture
ACCAGAGCAG
(
3
)
6.8
0.0068
P8 GC+1d culture
TTTCCTTAGG
(
4
)
5.7
0.0057
P8 GC+SHH+1d culture
ACCAGAGCAG
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GTGGCTCAAA
(
2
)
7
0.007
P8 GC+SHH+1d culture
TTTCCTTAGG
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGCATCTCT
(
2
)
1.2
0.0012
3T3 fibroblasts
ACCAGAGCAG
(
3
)
17.5
0.0175
3T3 fibroblasts
GTGGCTCAAA
(
2
)
10.5
0.0105
E15 cortex
GTGGCTCAAA
(
2
)
19.8
0.0198
P1 cortex
GTGGCTCAAA
(
2
)
18.2
0.0182
P1 cortex
TTTCCTTAGG
(
4
)
9.1
0.0091
P1 cortex
ACCAGAGCAG
(
3
)
4.5
0.0045
Hypothalamus
GTGGCTCAAA
(
2
)
5.4
0.0054
E12.5 retina
GTGGCTCAAA
(
2
)
11.3
0.0113
E12.5 retina
ACCAGAGCAG
(
3
)
5.6
0.0056
E12.5 retina
TTTCCTTAGG
(
4
)
3.8
0.0038
E12.5 retina
TGGCATCTCT
(
2
)
1.9
0.0019
E14.5 retina
GTGGCTCAAA
(
2
)
18.2
0.0182
E14.5 retina
ACCAGAGCAG
(
3
)
10.9
0.0109
E14.5 retina
TGGCATCTCT
(
2
)
1.8
0.0018
E16.5 retina
GTGGCTCAAA
(
2
)
9.1
0.0091
E16.5 retina
ACCAGAGCAG
(
3
)
7.2
0.0072
E16.5 retina
TTTCCTTAGG
(
4
)
7.2
0.0072
E18.5 retina
ACCAGAGCAG
(
3
)
5.5
0.0055
E18.5 retina
GTGGCTCAAA
(
2
)
5.5
0.0055
E18.5 retina
TGGCATCTCT
(
2
)
1.8
0.0018
P0.5 retina
GTGGCTCAAA
(
2
)
17.7
0.0177
P0.5 retina
ACCAGAGCAG
(
3
)
5.9
0.0059
P0.5 retina
TTTCCTTAGG
(
4
)
2
0.002
P2.5 retina
ACCAGAGCAG
(
3
)
10.6
0.0106
P2.5 retina
GTGGCTCAAA
(
2
)
10.6
0.0106
P2.5 retina
TTTCCTTAGG
(
4
)
3.5
0.0035
P2.5 retina
TGGCATCTCT
(
2
)
1.8
0.0018
P4.5 retina
ACCAGAGCAG
(
3
)
11.9
0.0119
P4.5 retina
GTGGCTCAAA
(
2
)
7.9
0.0079
P4.5 retina
TGGCATCTCT
(
2
)
4
0.004
P4.5 retina
TTTCCTTAGG
(
4
)
2
0.002
P6.5 retina
GTGGCTCAAA
(
2
)
11.7
0.0117
P6.5 retina
TGGCATCTCT
(
2
)
3.3
0.0033
P6.5 retina
TTTCCTTAGG
(
4
)
3.3
0.0033
P6.5 retina
ACCAGAGCAG
(
3
)
1.7
0.0017
P10.5 crx- retina
TTTCCTTAGG
(
4
)
16.7
0.0167
P10.5 crx- retina
ACCAGAGCAG
(
3
)
5.6
0.0056
P10.5 crx- retina
GTGGCTCAAA
(
2
)
3.7
0.0037
P10.5 crx- retina
TGGCATCTCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTCAAA
(
2
)
7.7
0.0077
P10.5 crx+ retina
ACCAGAGCAG
(
3
)
5.8
0.0058
Adult retinal
ACCAGAGCAG
(
3
)
11.1
0.0111
Adult retinal
TTTCCTTAGG
(
4
)
7.4
0.0074
Adult retinal
GTGGCTCAAA
(
2
)
1.9
0.0019
Adult retinal
TGGCATCTCT
(
2
)
1.9
0.0019
ONL
TTTCCTTAGG
(
4
)
9.6
0.0096
ONL
GTGGCTCAAA
(
2
)
5.7
0.0057
ONL
ACCAGAGCAG
(
3
)
1.9
0.0019
ONL
TGGCATCTCT
(
2
)
1.9
0.0019
