Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40909	Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	18		20358
Gene Ontology	development | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA6A[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAGCTCTG (2) 6.5 0.0065 Cb medulloblastoma AGGCAGTGAG (2) TAAATTTGTG 4.6 0.0046 P8 GC+1d culture AACAGCTCTG (2) AACCTGAGCG AGGCAGTGAG (2) ATAGAGTAAA GACCTCCAGT TAAATTTGTG 33 0.033 P8 GC+SHH+1d culture AACAGCTCTG (2) AACCTGAGCG AGGCAGTGAG (2) ATAGAGTAAA GACCTCCAGT TAAATTTGTG 16.5 0.0165 E15 cortex AACCTGAGCG 4.9 0.0049 P1 cortex AACAGCTCTG (2) 4.5 0.0045 E12.5 retina AACAGCTCTG (2) ATAGAGTAAA 3.8 0.0038 E14.5 retina AACAGCTCTG (2) TAAATTTGTG 7.3 0.0073 P0.5 retina AACAGCTCTG (2) AACCTGAGCG 7.8 0.0078 P2.5 retina AACAGCTCTG (2) GACCTCCAGT TAAATTTGTG 5.4 0.0054 P6.5 retina AGGCAGTGAG (2) 1.7 0.0017 P10.5 crx- retina AACCTGAGCG 1.9 0.0019 P10.5 crx+ retina AACAGCTCTG (2) AGGCAGTGAG (2) 3.8 0.0038 Adult retinal AACAGCTCTG (2) TAAATTTGTG 5.6 0.0056 ONL AACCTGAGCG 3.8 0.0038