Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.4269 5730422P05RikRIKEN cDNA 5730422P05 gene 18    67762 
 Mm.4269 Tcf4transcription factor 4 18    21413 
 Mm.4269 4732423E21RikRIKEN cDNA 4732423E21 gene 18    106967 
 Mm.4269 6030446J10RikRIKEN cDNA 6030446J10 gene 18    320848 
 Mm.4269 9630026C02RikRIKEN cDNA 9630026C02 gene 18    320591 
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 216 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGTCAGATTTT (8)32.60.0326
P8 Cb GCACCGTTCTGT (5)21.20.0212
P8 Cb GCGGACAGATGT (5)13.10.0131
P8 Cb GCTGTTACTGAA (6)11.40.0114
P8 Cb GCTTCAGAAATG (6)8.20.0082
P8 Cb GCTTGTGCTTGT (5)8.20.0082
P8 Cb GCATGTTTGTTT (10)4.90.0049
P8 Cb GCGGACTTGAAG (9)4.90.0049
P8 Cb GCTAGACTCTTG (7)4.90.0049
P8 Cb GCAAAAAATTGA (9)3.30.0033
P8 Cb GCGATATTACAA (5)3.30.0033
P8 Cb GCAAATTGCAGC (6)1.60.0016
P8 Cb GCAACGTTTTTG (5)1.60.0016
P8 Cb GCTATCAGTGCC (5)1.60.0016
P8 Cb GCTATTCAGAAA (6)1.60.0016
P8 Cb GCTGAAGCGCTG (7)1.60.0016
P8 Cb GCTGTGTGCGTG (14)1.60.0016
P8 Cb GCTTCTCACCAG (6)1.60.0016
Cb medulloblastomaTTCAGAAATG (6)16.20.0162
Cb medulloblastomaACCGTTCTGT (5)9.20.0092
Cb medulloblastomaTGTGTGCGTG (14)4.60.0046
Cb medulloblastomaAAAAAATTAA (11)2.30.0023
Cb medulloblastomaAAATTGCAGC (6)2.30.0023
Cb medulloblastomaGGACTTGAAG (9)2.30.0023
Cb medulloblastomaTAAAAATATA (7)2.30.0023
Cb medulloblastomaTATTAAGGAA (5)2.30.0023
Cb medulloblastomaTTATCATAAA (5)2.30.0023
P8 GC+1d cultureACCGTTCTGT (5)29.70.0297
P8 GC+1d cultureTGTTACTGAA (6)20.50.0205
P8 GC+1d cultureGTCAGATTTT (8)160.016
P8 GC+1d cultureTTGTGCTTGT (5)80.008
P8 GC+1d cultureTTCAGAAATG (6)5.70.0057
P8 GC+1d cultureTATCAGTGCC (5)4.60.0046
P8 GC+1d cultureTGTGTGCGTG (14)4.60.0046
P8 GC+1d cultureAAATTGCAGC (6)3.40.0034
P8 GC+1d cultureTAGACTCTTG (7)3.40.0034
P8 GC+1d cultureGATATTACAA (5)2.30.0023
P8 GC+1d cultureGGACAGATGT (5)2.30.0023
P8 GC+1d cultureTATTCAGAAA (6)2.30.0023
P8 GC+1d cultureTGATTCGCTG (5)2.30.0023
P8 GC+1d cultureAAAAAATTAA (11)1.10.0011
P8 GC+1d cultureAGAAAATGAA (7)1.10.0011
P8 GC+1d cultureATGTGACTTT (7)1.10.0011
P8 GC+1d cultureCAGCATTGCC (6)1.10.0011
P8 GC+1d cultureGGTTTGTAAA (7)1.10.0011
P8 GC+1d cultureTATTAAGGAA (5)1.10.0011
P8 GC+1d cultureTCGTTTTCTT (5)1.10.0011
P8 GC+1d cultureTGAAGCGCTG (7)1.10.0011
P8 GC+1d cultureTTATCATAAA (5)1.10.0011
P8 GC+1d cultureTTCTCACCAG (6)1.10.0011
P8 GC+1d cultureTTTGTTTGTC (8)1.10.0011
P8 GC+SHH+1d cultureACCGTTCTGT (5)29.30.0293
P8 GC+SHH+1d cultureGTCAGATTTT (8)22.20.0222
P8 GC+SHH+1d cultureTGTTACTGAA (6)10.50.0105
P8 GC+SHH+1d cultureGGTTTGTAAA (7)4.70.0047
P8 GC+SHH+1d cultureTGTGTGCGTG (14)4.70.0047
P8 GC+SHH+1d cultureTTCAGAAATG (6)4.70.0047
P8 GC+SHH+1d cultureGGACAGATGT (5)3.50.0035
P8 GC+SHH+1d cultureAAAAAATTGA (9)2.30.0023
P8 GC+SHH+1d cultureAAATTGCAGC (6)2.30.0023
P8 GC+SHH+1d cultureATGTGACTTT (7)2.30.0023
P8 GC+SHH+1d cultureTATCAGTGCC (5)2.30.0023
P8 GC+SHH+1d cultureTCGTTTTCTT (5)2.30.0023
P8 GC+SHH+1d cultureTTGTGCTTGT (5)2.30.0023
P8 GC+SHH+1d cultureAAAAAATTAA (11)1.20.0012
P8 GC+SHH+1d cultureCCTGACCAAT (6)1.20.0012
P8 GC+SHH+1d cultureTAGACTCTTG (7)1.20.0012
P8 GC+SHH+1d cultureTATTAAGGAA (5)1.20.0012
P8 GC+SHH+1d cultureTGATTCGCTG (5)1.20.0012
P8 GC+SHH+1d cultureTTCTCACCAG (6)1.20.0012
3T3 fibroblastsTATCAGTGCC (5)70.007
3T3 fibroblastsCCAAGATTGT (6)3.50.0035
3T3 fibroblastsGGACAGATGT (5)3.50.0035
3T3 fibroblastsTTCAGAAATG (6)3.50.0035
E15 cortexGTCAGATTTT (8)24.70.0247
E15 cortexAAAAAATTGA (9)9.90.0099
E15 cortexACCGTTCTGT (5)9.90.0099
E15 cortexGGACAGATGT (5)9.90.0099
E15 cortexGGACTTGAAG (9)9.90.0099
E15 cortexTTCAGAAATG (6)9.90.0099
E15 cortexTATCAGTGCC (5)4.90.0049
E15 cortexTGTGTGCGTG (14)4.90.0049
E15 cortexTGTTACTGAA (6)4.90.0049
P1 cortexAAAAAATTGA (9)22.70.0227
P1 cortexTTGTGCTTGT (5)22.70.0227
P1 cortexGTCAGATTTT (8)13.60.0136
P1 cortexACCGTTCTGT (5)9.10.0091
P1 cortexGGACAGATGT (5)9.10.0091
P1 cortexGGACTTGAAG (9)9.10.0091
P1 cortexTGTGTGCGTG (14)9.10.0091
P1 cortexCCAAGATTGT (6)4.50.0045
P1 cortexTATCAGTGCC (5)4.50.0045
P1 cortexTATTAAGGAA (5)4.50.0045
P1 cortexTCGTTTTCTT (5)4.50.0045
HypothalamusAAAAAATTGA (9)1.80.0018
HypothalamusAAATTGCAGC (6)1.80.0018
HypothalamusGGACTTGAAG (9)1.80.0018
HypothalamusGTCAGATTTT (8)1.80.0018
HypothalamusTAAAAATATA (7)1.80.0018
E12.5 retinaAAATTGCAGC (6)1.90.0019
E12.5 retinaACCGTTCTGT (5)1.90.0019
E12.5 retinaGTCAGATTTT (8)1.90.0019
E12.5 retinaTAGACTCTTG (7)1.90.0019
E12.5 retinaTATTCAGAAA (6)1.90.0019
E12.5 retinaTGTGTGCGTG (14)1.90.0019
E12.5 retinaTGTTTCCATT (5)1.90.0019
E12.5 retinaTTCAGAAATG (6)1.90.0019
E12.5 retinaTTTGTTTGTC (8)1.90.0019
E14.5 retinaTTCAGAAATG (6)7.30.0073
E14.5 retinaACCGTTCTGT (5)5.50.0055
E14.5 retinaGTCAGATTTT (8)5.50.0055
E14.5 retinaAGAAAATGAA (7)1.80.0018
E14.5 retinaCAGCATTGCC (6)1.80.0018
E14.5 retinaGAAGAAAAAG (22)1.80.0018
E14.5 retinaGGACAGATGT (5)1.80.0018
E14.5 retinaTAGACTCTTG (7)1.80.0018
E16.5 retinaACCGTTCTGT (5)9.10.0091
E16.5 retinaGTCAGATTTT (8)5.40.0054
E16.5 retinaTGTTTCCATT (5)3.60.0036
E16.5 retinaTTCAGAAATG (6)3.60.0036
E16.5 retinaAAAAAATTAA (11)1.80.0018
E16.5 retinaAACGTTTTTG (5)1.80.0018
E16.5 retinaCCAAGATTGT (6)1.80.0018
E16.5 retinaTGAAGCGCTG (7)1.80.0018
E16.5 retinaTGTGTGCGTG (14)1.80.0018
E16.5 retinaTGTTACTGAA (6)1.80.0018
E18.5 retinaTTCAGAAATG (6)9.10.0091
E18.5 retinaACCGTTCTGT (5)7.30.0073
E18.5 retinaGTCAGATTTT (8)7.30.0073
E18.5 retinaAAAAAATTGA (9)5.50.0055
E18.5 retinaAAATTGCAGC (6)3.60.0036
E18.5 retinaTAGACTCTTG (7)3.60.0036
E18.5 retinaTGAAGCGCTG (7)3.60.0036
E18.5 retinaTGTTACTGAA (6)3.60.0036
E18.5 retinaCAGCATTGCC (6)1.80.0018
E18.5 retinaTTTGTTTGTC (8)1.80.0018
P0.5 retinaACCGTTCTGT (5)5.90.0059
P0.5 retinaGGACAGATGT (5)5.90.0059
P0.5 retinaAAAAAATTGA (9)3.90.0039
P0.5 retinaTGTGTGCGTG (14)3.90.0039
P0.5 retinaTTCAGAAATG (6)3.90.0039
P0.5 retinaAACGTTTTTG (5)20.002
P0.5 retinaATGTGACTTT (7)20.002
P0.5 retinaGTCAGATTTT (8)20.002
P0.5 retinaTGTTACTGAA (6)20.002
P0.5 retinaTTATCATAAA (5)20.002
P2.5 retinaACCGTTCTGT (5)14.10.0141
P2.5 retinaTGTTACTGAA (6)10.60.0106
P2.5 retinaGTCAGATTTT (8)8.80.0088
P2.5 retinaATGTTTGTTT (10)3.50.0035
P2.5 retinaAAAAAATTGA (9)1.80.0018
P2.5 retinaAGAAAATGAA (7)1.80.0018
P2.5 retinaCAGCATTGCC (6)1.80.0018
P2.5 retinaCCAAGATTGT (6)1.80.0018
P2.5 retinaGGACAGATGT (5)1.80.0018
P2.5 retinaGGTTTGTAAA (7)1.80.0018
P2.5 retinaTAGACTCTTG (7)1.80.0018
P2.5 retinaTATCAGTGCC (5)1.80.0018
P2.5 retinaTTCAGAAATG (6)1.80.0018
P2.5 retinaTTGTGCTTGT (5)1.80.0018
P4.5 retinaACCGTTCTGT (5)15.90.0159
P4.5 retinaGTCAGATTTT (8)40.004
P4.5 retinaTGTTACTGAA (6)40.004
P4.5 retinaTTCAGAAATG (6)40.004
P4.5 retinaAAAAAATTGA (9)20.002
P4.5 retinaAGAAAATGAA (7)20.002
P4.5 retinaATGTTTGTTT (10)20.002
P4.5 retinaCAGCATTGCC (6)20.002
P4.5 retinaGGACAGATGT (5)20.002
P4.5 retinaTCGTTTTCTT (5)20.002
P4.5 retinaTTGTGCTTGT (5)20.002
P6.5 retinaACCGTTCTGT (5)6.70.0067
P6.5 retinaTGTGTGCGTG (14)6.70.0067
P6.5 retinaAAAAAATTGA (9)50.005
P6.5 retinaTTCAGAAATG (6)50.005
P6.5 retinaGTCAGATTTT (8)3.30.0033
P6.5 retinaAAATTGCAGC (6)1.70.0017
P6.5 retinaAACGTTTTTG (5)1.70.0017
P6.5 retinaGAAGAAAAAG (22)1.70.0017
P6.5 retinaGGACAGATGT (5)1.70.0017
P6.5 retinaTAAAAATATA (7)1.70.0017
P6.5 retinaTATCAGTGCC (5)1.70.0017
P6.5 retinaTTATCATAAA (5)1.70.0017
P10.5 crx- retinaACCGTTCTGT (5)14.90.0149
P10.5 crx- retinaAAAAAATTGA (9)7.40.0074
P10.5 crx- retinaTTCAGAAATG (6)7.40.0074
P10.5 crx- retinaCCTGACCAAT (6)3.70.0037
P10.5 crx- retinaTGAAGCGCTG (7)3.70.0037
P10.5 crx- retinaGAAGAAAAAG (22)1.90.0019
P10.5 crx- retinaTATTCAGAAA (6)1.90.0019
P10.5 crx- retinaTGTGTGCGTG (14)1.90.0019
P10.5 crx- retinaTGTTACTGAA (6)1.90.0019
P10.5 crx- retinaTTTGTTTGTC (8)1.90.0019
P10.5 crx+ retinaACCGTTCTGT (5)15.40.0154
P10.5 crx+ retinaTGTTACTGAA (6)7.70.0077
P10.5 crx+ retinaTTCAGAAATG (6)7.70.0077
P10.5 crx+ retinaAAATTGCAGC (6)3.80.0038
P10.5 crx+ retinaGTCAGATTTT (8)3.80.0038
P10.5 crx+ retinaCCTGACCAAT (6)1.90.0019
P10.5 crx+ retinaGGACAGATGT (5)1.90.0019
P10.5 crx+ retinaGGACTTGAAG (9)1.90.0019
P10.5 crx+ retinaTATTCAGAAA (6)1.90.0019
P10.5 crx+ retinaTTGTGCTTGT (5)1.90.0019
Adult retinalTGTGTGCGTG (14)9.30.0093
Adult retinalTTCAGAAATG (6)5.60.0056
Adult retinalACCGTTCTGT (5)1.90.0019
Adult retinalCCAAGATTGT (6)1.90.0019
Adult retinalCCTGACCAAT (6)1.90.0019
Adult retinalTATCAGTGCC (5)1.90.0019
Adult retinalTTGTGCTTGT (5)1.90.0019
Adult retinalTTTGTTTGTC (8)1.90.0019
ONLTTCAGAAATG (6)5.70.0057
ONLGTCAGATTTT (8)3.80.0038
ONLAAAAAATTAA (11)1.90.0019
ONLACCGTTCTGT (5)1.90.0019
ONLTTCTCACCAG (6)1.90.0019