Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43331	Sfrs5	splicing factor, arginine/serine-rich 5 (SRp40, HRS)	12		20384
Gene Ontology	mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | regulation of transcription, DNA-dependent | RNA binding | spliceosome complex
Human Homolog	SFRS5[splicing factor, arginine/serine-rich 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTTTCTC AGACAAGCTG 8.1 0.0081 Cb medulloblastoma AGACAAGCTG CCCGGGCTCG CCTTTGGTCT (2) TTTTTTAAAA (3) 11.5 0.0115 P8 GC+1d culture AAGGTTTCTC AGACAAGCTG CCCGGGCTCG 19.5 0.0195 P8 GC+SHH+1d culture AGACAAGCTG CCTTTGGTCT (2) TTTTTTAAAA (3) 9.4 0.0094 3T3 fibroblasts AGACAAGCTG CCTTTGGTCT (2) 31.5 0.0315 E15 cortex AGACAAGCTG 4.9 0.0049 P1 cortex AGACAAGCTG 18.2 0.0182 Hypothalamus AAGGTTTCTC AGACAAGCTG AGTGGCTGTC 18.1 0.0181 E12.5 retina AAGGTTTCTC AGACAAGCTG 18.8 0.0188 E14.5 retina AAGGTTTCTC AGACAAGCTG 3.6 0.0036 E16.5 retina CCCGGGCTCG 1.8 0.0018 E18.5 retina AAGGTTTCTC AGACAAGCTG AGTGGCTGTC TTTTTTAAAA (3) 18.2 0.0182 P0.5 retina AAGGTTTCTC AGACAAGCTG 45.2 0.0452 P2.5 retina AAGGTTTCTC AGACAAGCTG ATGCCCGGCT TTTTTTAAAA (3) 21.2 0.0212 P4.5 retina AAGGTTTCTC AGACAAGCTG CCCGGGCTCG 13.9 0.0139 P6.5 retina AGACAAGCTG AGTGGCTGTC ATGCCCGGCT 18.4 0.0184 P10.5 crx- retina AGACAAGCTG 9.3 0.0093 P10.5 crx+ retina AGACAAGCTG ATGCCCGGCT 15.4 0.0154 Adult retinal AAGGTTTCTC AGACAAGCTG AGTGGCTGTC 29.7 0.0297 ONL AAGGTTTCTC AGACAAGCTG 3.8 0.0038