Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4419	Rpl5	ribosomal protein L5	5	5 58.5 cM	19983
Gene Ontology	5S rRNA binding | cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | rRNA binding | structural constituent of ribosome
Human Homolog	RPL5[ribosomal protein L5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCTTCAAA AGAAGAAGCC ATGTGCTTCC (2) CGCTACCTAA CTGCTATCCG GACAAGATCT TCTGGAGTTA TGCATATGCT 104.3 0.1043 Cb medulloblastoma CTGCTATCCG 30.1 0.0301 P8 GC+1d culture ATGTGCTTCC (2) CGCTACCTAA CTGCTATCCG GACAAGATCT TGCATATGCT TTGCTATCCG 83.2 0.0832 P8 GC+SHH+1d culture ATGTGCTTCC (2) CTGCTATCCG TGCATATGCT 87.8 0.0878 3T3 fibroblasts ATGTGCTTCC (2) CTGCTATCCG TGCATATGCT TTGCTATCCG 108.6 0.1086 E15 cortex CTGCTATCCG TGCATATGCT TTGCTATCCG 93.9 0.0939 P1 cortex CTGCTATCCG TGCATATGCT 45.4 0.0454 Hypothalamus ATGTGCTTCC (2) CTGCTATCCG TCTGGAGTTA TGCATATGCT 32.5 0.0325 E12.5 retina ATGTGCTTCC (2) CTGCTATCCG TGCATATGCT 129.6 0.1296 E14.5 retina ATGTGCTTCC (2) CGCTACCTAA CTGCTATCCG GACAAGATCT TCTGGAGTTA TGCATATGCT 74.6 0.0746 E16.5 retina AGAAGAAGCC ATGTGCTTCC (2) CTGCTATCCG GACAAGATCT TCTGGAGTTA TGCATATGCT 92.3 0.0923 E18.5 retina AACCTTCAAA ATGTGCTTCC (2) CTGCTATCCG GACAAGATCT TCTGGAGTTA TGCATATGCT 70.8 0.0708 P0.5 retina ATGTGCTTCC (2) CTGCTATCCG TGCATATGCT 119.8 0.1198 P2.5 retina ATGTGCTTCC (2) CTGCTATCCG TCTGGAGTTA TGCATATGCT 52.9 0.0529 P4.5 retina ATGTGCTTCC (2) CTGCTATCCG 45.6 0.0456 P6.5 retina CTGCTATCCG TGCATATGCT 45 0.045 P10.5 crx- retina ATGTGCTTCC (2) CTGCTATCCG TGCATATGCT 52.1 0.0521 P10.5 crx+ retina AGAAGAAGCC CTGCTATCCG TGCATATGCT TTGCTATCCG 34.6 0.0346 Adult retinal ATGTGCTTCC (2) CTGCTATCCG 31.5 0.0315 ONL CGCTACCTAA CTGCTATCCG 19.1 0.0191