Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4438	Hmga1	high mobility group AT-hook 1	17	17 A3.3 (17 13.19 cM)	15361
Gene Ontology	chromatin | chromosome | chromosome organization and biogenesis (sensu Eukarya) | DNA binding | DNA packaging | nucleus | regulation of transcription, DNA-dependent | spermatogenesis
Human Homolog	HMGA1[high mobility group AT-hook 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTCTGGTTC TTCATTCTTA (2) 8.1 0.0081 Cb medulloblastoma GTTCTGGTTC 2.3 0.0023 P8 GC+1d culture TTCATTCTTA (2) 6.8 0.0068 P8 GC+SHH+1d culture TTCATTCTTA (2) 7 0.007 3T3 fibroblasts TTCATTCTTA (2) 3.5 0.0035 E15 cortex TTCATTCTTA (2) 4.9 0.0049 P1 cortex TTCATTCTTA (2) 13.6 0.0136 Hypothalamus GTTCTGGTTC TTCATTCTTA (2) 3.6 0.0036 E12.5 retina TTCATTCTTA (2) 15 0.015 E14.5 retina TTCATTCTTA (2) 3.6 0.0036 E16.5 retina GTTCTGGTTC TTCATTCTTA (2) 7.2 0.0072 E18.5 retina TTCATTCTTA (2) 1.8 0.0018 P0.5 retina TTCATTCTTA (2) 31.4 0.0314 P2.5 retina TTCATTCTTA (2) 10.6 0.0106 P4.5 retina GTTCTGGTTC TCCCCCACAA 4 0.004 P6.5 retina GTTCTGGTTC TCCCCCACAA 5 0.005 P10.5 crx- retina TTCATTCTTA (2) 3.7 0.0037 P10.5 crx+ retina TTCATTCTTA (2) 3.8 0.0038 Adult retinal TTCATTCTTA (2) 9.3 0.0093 ONL TTCATTCTTA (2) 1.9 0.0019