Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5246	Ppia	peptidylprolyl isomerase A	11	11 1.0 cM	268373
Gene Ontology	cytosol | isomerase activity | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	PPIA[peptidylprolyl isomerase A (cyclophilin A)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCGTTTTGG CTTGCCATCC GAGCGCTTTG GAGCGTTTTG GCAAATGCTG GTCAACCCCA TAGCGTTTTG TGCCAGGGTG TGGTCTTTGG 156.7 0.1567 Cb medulloblastoma AACATTGTGG CCTTCTTTCA GACAAGATGC (2) GAGCGTTTTG GCAAATGCTG 106.4 0.1064 P8 GC+1d culture CTTGCCATCC GACAAGATGC (2) GAGCATTTTG GAGCGCTTTG GAGCGTTTTG GCAAATGCTG TCCTGTAATC TGCCAGGGTG 157.4 0.1574 P8 GC+SHH+1d culture CCTTCTTTCA CTTGCCATCC GAGCGCTTTG GAGCGTTCTG GAGCGTTTTG GCAAATGCTG TGCCAGGGTG TGGTCTTTGG 140.6 0.1406 3T3 fibroblasts GACAAGATGC (2) GAGCGTTTGG GAGCGTTTTG 410.1 0.4101 E15 cortex AACATTGTGG GAGCCGTTTT GAGCGTTTTG TAGCGTTTTG 242.4 0.2424 P1 cortex GAGCGTTCTG GAGCGTTTTG 163.6 0.1636 Hypothalamus GACAAGATGC (2) GAGCGTTTTG GCAAATGCTG GTCAACCCCA TGCCAGGGTG TGGTCTTTGG 106.8 0.1068 E12.5 retina CCTTCTTTCA CTTGCCATCC GAGCGCTTTG GAGCGTTTTG GTCAACCCCA 124 0.124 E14.5 retina CCTTCTTTCA CTTGCCATCC GACAAGATGC (2) GAGCGTTTTG GTCAACCCCA 96.5 0.0965 E16.5 retina AACATTGTGG CCTTCTTTCA CTTGCCATCC GACAAGATGC (2) GAGCCGTTTT GAGCGTTTGG GAGCGTTTTG GCAAATGCTG GTCAACCCCA TGCCAGGGTG 233.6 0.2336 E18.5 retina CTTGCCATCC GAGCGTTTGG GAGCGTTTTG GCAAATGCTG TGGTCTTTGG 80.1 0.0801 P0.5 retina CCTTCTTTCA CTTGCCATCC GAGCCGTTTT GAGCGTTCTG GAGCGTTTGG GAGCGTTTTG GAGCGTTTTT GCAAATGCTG TGCCAGGGTG TGGTCTTTGG 327.7 0.3277 P2.5 retina CCTTCTTTCA CTTGCCATCC GACAAGATGC (2) GAGCCGTTTT GAGCGCTTTG GAGCGTTTGG GAGCGTTTTG GTCAACCCCA TAGCGTTTTG 148.1 0.1481 P4.5 retina CCTTCTTTCA GACAAGATGC (2) GAGCATTTTG GAGCCGTTTT GAGCGTTTTG 81.3 0.0813 P6.5 retina AGCGTTTTGG CCTTCTTTCA GAGCGTTTTG GCAAATGCTG TGGTCTTTGG 70.1 0.0701 P10.5 crx- retina AACATTGTGG AGCGTTTTGG CCTTCTTTCA CTTGCCATCC GACAAGATGC (2) GAGCCGTTTT GAGCGTTTTG GAGCGTTTTT GCAAATGCTG GTCAACCCCA TGCCAGGGTG 442.3 0.4423 P10.5 crx+ retina GAGCCGTTTT GAGCGCTTTG GAGCGTTTTG GAGCGTTTTT TCCTGTAATC TGCCAGGGTG 184.4 0.1844 Adult retinal GAGCCGTTTT GAGCGTTTTG TGGTCTTTGG 103.7 0.1037 ONL GACAAGATGC (2) GAGCGTTTTG TCCTGTAATC 40.2 0.0402