Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5286	Arbp	acidic ribosomal phosphoprotein P0	5		11837
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP0[ribosomal protein, large, P0]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 234 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGCGCAAGG (2) ATGGCAAGCT CCTGAACATC (3) CGGATCTGCT (2) CTGAACACCT CTGAACATCT (2) CTGAACATTT (2) CTGAACTTCT CTGAGCACTC GAGAAAAAAA (2) GAGCACATCC GGCCACCTGG (2) GTCTGTGGAG (2) GTGGCCCTTG GTTCCAGCCG TCGCTCCGAG (2) TCTGTGGAGA (3) TGAACATCTC (3) TGTCTGTGGA TTCAGCAGTG 109.2 0.1092 Cb medulloblastoma ATGGCAAGCT CTGAACATCT (2) CTGAACGTCT GAGAAAAAAA (2) GTCTGTGGAG (2) GTGGCCCTTG GTTCCAGCCG TCTGTGGAGA (3) 41.5 0.0415 P8 GC+1d culture AGGCTGCTGG ATGGCAAGCT CTAAACATCT CTGAACACCT CTGAACATCC (2) CTGAACATCT (2) CTGAACGTCT GAGAAAAAAA (2) GAGCACATCC GCTGGTGGAG (3) GGCTTCCTGG (2) GGGAAGGAGG GTCTGTGGAG (2) GTTCCAGCCG TGAACATCTC (3) TTCAGCAGTG 105.8 0.1058 P8 GC+SHH+1d culture ATGCGCAAGG (2) ATGGCAAGCT CCTGAACATC (3) CGGATCTGCT (2) CTGAACATCC (2) CTGAACATCT (2) CTGAGCACTC GAGAAAAAAA (2) GAGCACATCC GGCTTCCTGG (2) GGGAAGGGAA (4) GGGTACCAGG (2) GTCTGTGGAG (2) GTTCCAGCCG TGAACATCTC (3) TTCAGCAGTG 117.1 0.1171 3T3 fibroblasts AGGCTGCTGG ATGGCAAGCT CTGAACACCT CTGAACATCT (2) GAGCACATCC GGCTCCAAGC GTCATAGCTG (2) GTCTGTGGAG (2) GTTCCAGCCG TCTGTGGAGA (3) TTCAGCAGTG 196.2 0.1962 E15 cortex AGGCTGCTGG ATGCGCAAGG (2) CTGAACATCC (2) CTGAACATCT (2) GGCTTCCTGG (2) GTCATAGCTG (2) GTTCCAGCCG TGAACATCTC (3) 88.7 0.0887 P1 cortex AAGAAGACAG (4) CTAAACATCT CTGAACATCT (2) GAGAAAAAAA (2) GAGCACATCC GTCTGTGGAG (2) GTTCCAGCCG TGTCTGTGGA 113.4 0.1134 Hypothalamus AAGAAGACAG (4) CGGATCTGCT (2) CTGAACATCT (2) CTGAACGTCT CTGAACTTCT CTGCTGGCCA (2) GAGAAAAAAA (2) GAGCACATCC GGGTACCAGG (2) GTTCCAGCCG 38 0.038 E12.5 retina ATGCGCAAGG (2) CTGAACATCC (2) CTGAACATCT (2) CTGAACTTCT CTGAATATCT CTGATCATCT GAGCACATCC GGGAAGGGAA (4) GGGTACCAGG (2) GTCTGTGGAG (2) GTTCCAGCCG TGAACATCTC (3) TTCAGCAGTG 90.4 0.0904 E14.5 retina ATGCGCAAGG (2) ATGGCAAGCT CGGATCTGCT (2) CTGAACATCC (2) CTGAACATCT (2) CTGAACGTCT CTGAATATCT GAGAAAAAAA (2) GAGCACATCC GGCTCCAAGC GGCTTCCTGG (2) GGGAAGGAGG TCGCTCCGAG (2) TGAACATCTC (3) TTCAGCAGTG 87.1 0.0871 E16.5 retina AAGAAGACAG (4) AGGCTGCTGG ATGCGCAAGG (2) CTGAACATCC (2) CTGAACATCT (2) CTGAACATTT (2) CTGAGCACTC CTGATCATCT GAGAAAAAAA (2) GAGCACATCC GGCTTCCTGG (2) GTCTGTGGAG (2) TTCAGCAGTG 52.4 0.0524 E18.5 retina CTGAACATCT (2) CTGAACGTCT GAGAAAAAAA (2) GAGCACATCC GCTGGTGGAG (3) GGCTTCCTGG (2) GGGTACCAGG (2) GTTCCAGCCG TGAACATCTC (3) TGTTTGACAA (3) TTCAGCAGTG 56.2 0.0562 P0.5 retina ATGGCAAGCT CGGATCTGCT (2) CTGAACACCT CTGAACATCT (2) CTGAACATTT (2) CTGAATATCT CTGAGCACTC GAGAAAAAAA (2) GAGCACATCC GGCTTCCTGG (2) GTCATAGCTG (2) GTCTGTGGAG (2) GTTCCAGCCG TGAACATCTC (3) TGTCTGTGGA 137.6 0.1376 P2.5 retina CCTGAACATC (3) CGGATCTGCT (2) CTGAACATCT (2) CTGAGCACTC GAGAAAAAAA (2) GAGCACATCC GGGAAGGAGG GGGAAGGGAA (4) GGGTACCAGG (2) GTCATAGCTG (2) GTCTGTGGAG (2) TGAACATCTC (3) 58.3 0.0583 P4.5 retina ATGGCAAGCT CGGATCTGCT (2) CTGAACATCT (2) GAGAAAAAAA (2) GGGTACCAGG (2) GTCATAGCTG (2) TGAACATCTC (3) TGTTTGACAA (3) TTCAGCAGTG 49.6 0.0496 P6.5 retina AGGCTGCTGG ATGGCAAGCT CTGAACATCT (2) GAGAAAAAAA (2) GGCTTCCTGG (2) GGGAAGGGAA (4) GGGTACCAGG (2) GTCATAGCTG (2) GTCTGTGGAG (2) GTTCCAGCCG TGAACATCTC (3) TTCAGCAGTG 58.5 0.0585 P10.5 crx- retina ATGGCAAGCT CTGAACATCC (2) CTGAACATCT (2) GAGAAAAAAA (2) GAGCACATCC GGCTTCCTGG (2) GTCTGTGGAG (2) TCGCTCCGAG (2) TCTGTGGAGA (3) TGAACATCTC (3) 37.4 0.0374 P10.5 crx+ retina ATGCGCAAGG (2) CTGAACATCC (2) CTGAACATCT (2) CTGCTGGCCA (2) GAGAAAAAAA (2) GCTGGTGGAG (3) GGGAAGGAGG GTCTGTGGAG (2) GTTCCAGCCG 32.5 0.0325 Adult retinal CCTGAACATC (3) CTAAACATCT CTGAACATCC (2) CTGAACATCT (2) CTGAACGTCT CTGCTGGCCA (2) GGCTTCCTGG (2) GTCATAGCTG (2) GTCTGTGGAG (2) TGTCTGTGGA TGTTTGACAA (3) 35.6 0.0356 ONL CTGAACATCT (2) CTGAATATCT GAGAAAAAAA (2) GGCCACCTGG (2) GGCTCCAAGC GGGAAGGGAA (4) GTCATAGCTG (2) 22.8 0.0228