Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.5291	Rps5	ribosomal protein S5	7		20103
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | ribosome biogenesis | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS5[ribosomal protein S5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 137 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGATGCCT ACCTCATTTA AGCCTACAGA CCTCTTCCCC (2) CCTTTGAGAT (2) CCTTTGGGAT (2) GAAGGAAAAA (2) GAGTTAGTAA GCCACCGCCC (2) TACTGCCTGG (2) TCAACACGCA (2) 79.7 0.0797 Cb medulloblastoma AGATGAGTCA (2) AGCCTACAGA CAGAGCCTGT CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GAGTTAGTAA GCCACCGCCC (2) 34.5 0.0345 P8 GC+1d culture AATGATGCCT CCTCTTCCCC (2) CCTTTGAGAT (2) GAGCGTGTGC GAGTTAGTAA 73 0.073 P8 GC+SHH+1d culture AATGATGCCT AGCCTACAGA CAGAGCCTGT CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GAGTTAGTAA 72.7 0.0727 3T3 fibroblasts AATGATGCCT CCTTTGAGAT (2) GTCATAGCTG (2) TCAACACGCA (2) 98.1 0.0981 E15 cortex AGATGAGTCA (2) AGCCTACAGA CCCTTGAGAT (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GTCATAGCTG (2) TACTGCCTGG (2) 69 0.069 P1 cortex AATGATGCCT AGATGAGTCA (2) CCTTTGAGAT (2) GAAGGAAAAA (2) TCAACACGCA (2) 77.2 0.0772 Hypothalamus AACTCCCTCA AGCCTACAGA CCTTTGAGAT (2) CCTTTGGGAT (2) GAGTTAGTAA 12.6 0.0126 E12.5 retina AATGATGCCT AGCCTACAGA CCTTTGAGAT (2) CCTTTGGGAT (2) GAAGGAAAAA (2) GAGTTAGTAA TCAACACGCA (2) 103.3 0.1033 E14.5 retina AATGATGCCT ACCTCATTTA AGATGAGTCA (2) CCTTTGAGAT (2) GAAGGAAAAA (2) 23.6 0.0236 E16.5 retina AATGATGCCT AGATGAGTCA (2) AGCCTACAGA ATGAGCTTTT CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GAGTTAGTAA 47 0.047 E18.5 retina AATGATGCCT ATGAGCTTTT ATGGCATTTT CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GAGTTAGTAA TCAACACGCA (2) 34.5 0.0345 P0.5 retina AATGATGCCT AGATGAGTCA (2) AGCCTACAGA CCTTTGAGAT (2) CCTTTGGGAT (2) GAAGGAAAAA (2) GAGTTAGTAA GTCATAGCTG (2) TACTGCCTGG (2) 115.9 0.1159 P2.5 retina AATGATGCCT ACCTCATTTA AGATGAGTCA (2) CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GTCATAGCTG (2) 28.2 0.0282 P4.5 retina AACTCCCTCA AATGATGCCT AGATGAGTCA (2) AGCCTACAGA CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GAGTTAGTAA GTCATAGCTG (2) 57.5 0.0575 P6.5 retina AATGATGCCT ACCTCATTTA CCCTTGAGAT (2) CCTCTTCCCC (2) CCTTTGAGAT (2) GTCATAGCTG (2) 20 0.02 P10.5 crx- retina AATGATGCCT CCTCTTCCCC (2) CCTTTGAGAT (2) GAGTTAGTAA 63.3 0.0633 P10.5 crx+ retina AATGATGCCT AGCCTACAGA ATGAGCTTTT CCCTTGAGAT (2) CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) 34.4 0.0344 Adult retinal AACTCCCTCA AATGATGCCT AGCCTACAGA ATGAACACTG (9) CAGAGCCTGT CCTCTTCCCC (2) CCTTTGAGAT (2) GTCATAGCTG (2) 42.8 0.0428 ONL AGCCTACAGA ATGAACACTG (9) ATGGCATTTT CCTCTTCCCC (2) CCTTTGAGAT (2) GAAGGAAAAA (2) GTCATAGCTG (2) 47.7 0.0477