Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.641	Atf4	activating transcription factor 4	15	15 43.3 cM	11911
Gene Ontology	DNA binding | gluconeogenesis | nucleus | positive regulation of transcription from Pol II promoter | protein binding | regulation of transcription, DNA-dependent | specific RNA polymerase II transcription factor activity | transcription factor complex | transcriptional activator activity
Human Homolog	ATF4[activating transcription factor 4 (tax-responsive enhancer element B67)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAAGAGTC (2) GCGTATTAGA TGATGCCAAT (2) TGTAAAGGAG 24.5 0.0245 Cb medulloblastoma ACCAAGAGTC (2) GCGCTCTTCA TGATGCCAAT (2) TGTAAAGGAG 20.7 0.0207 P8 GC+1d culture ACCAAGAGTC (2) TGATGCCAAT (2) TGTAAAGGAG 34.3 0.0343 P8 GC+SHH+1d culture ACCAAGAGTC (2) TGATGCCAAT (2) TGTAAAGGAG 16.4 0.0164 3T3 fibroblasts TGTAAAGGAG 21 0.021 E15 cortex TGATGCCAAT (2) TGTAAAGGAG 9.8 0.0098 P1 cortex TGTAAAGGAG 9.1 0.0091 Hypothalamus TGTAAAGGAG 5.4 0.0054 E12.5 retina ACCAAGAGTC (2) TGATGCCAAT (2) TGTAAAGGAG 15.1 0.0151 E14.5 retina ACCAAGAGTC (2) TGATGCCAAT (2) 3.6 0.0036 E16.5 retina TGATGCCAAT (2) TGTAAAGGAG 5.4 0.0054 E18.5 retina TGATGCCAAT (2) TGTAAAGGAG 9.1 0.0091 P0.5 retina TGATGCCAAT (2) TGTAAAGGAG 11.8 0.0118 P2.5 retina ACCAAGAGTC (2) TGATGCCAAT (2) TGTAAAGGAG 14.1 0.0141 P4.5 retina TGATGCCAAT (2) TGTAAAGGAG 8 0.008 P6.5 retina TGATCTTTTT TGATGCCAAT (2) TGTAAAGGAG 18.3 0.0183 P10.5 crx- retina ACCAAGAGTC (2) TGATGCCAAT (2) TGTAAAGGAG 27.8 0.0278 P10.5 crx+ retina ACCAAGAGTC (2) GCGCTCTTCA TGATGCCAAT (2) TGTAAAGGAG 17.3 0.0173 Adult retinal ACCAAGAGTC (2) TGATCTTTTT TGATGCCAAT (2) TGTAAAGGAG 20.5 0.0205 ONL TGTAAAGGAG 5.7 0.0057