Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.85410	Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	9		20588
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | DNA packaging | intracellular | nucleus | organogenesis | SWI/SNF complex
Human Homolog	SMARCC1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGTCAGTT GAAGACCCCA TCATTGAACG TGATGAGCAG 8.1 0.0081 P8 GC+1d culture TCATTGAACG TGATGAGCAG 2.2 0.0022 P8 GC+SHH+1d culture ACTGTCAGTT ATTAAACCTG GAAGACCCCA TGATGAGCAG 10.5 0.0105 3T3 fibroblasts TGATGAGCAG 21 0.021 E15 cortex ACTGTCAGTT GAAGACCCCA TGATGAGCAG 14.7 0.0147 P1 cortex ACTGTCAGTT ATTAAACCTG 18.1 0.0181 Hypothalamus ATTAAACCTG 1.8 0.0018 E12.5 retina ATTAAACCTG TGATGAGCAG 3.8 0.0038 E14.5 retina ACTGTCAGTT TCATTGAACG TGATGAGCAG 9.1 0.0091 E16.5 retina ATTAAACCTG TGATGAGCAG 5.4 0.0054 P0.5 retina ATTAAACCTG 2 0.002 P2.5 retina ATTAAACCTG TCATTGAACG 3.6 0.0036 P4.5 retina ACTGTCAGTT TCATTGAACG 6 0.006 P6.5 retina TCATTGAACG TGATGAGCAG 3.4 0.0034 P10.5 crx+ retina ATTAAACCTG TCATTGAACG TGATGAGCAG 5.7 0.0057 Adult retinal ATTAAACCTG GAAGACCCCA 3.8 0.0038