Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.930	Ctsl	cathepsin L	13	13 30.0 cM	13039
Gene Ontology	actinidain activity | cathepsin L activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSL2[cathepsin L2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGATGAACG (2) GGTTAAATGT 13 0.013 Cb medulloblastoma GGTTAAATGT 9.2 0.0092 P8 GC+1d culture GGGGTTCTGT GGGTTCTGTT (2) GGTTAAATGT 25 0.025 P8 GC+SHH+1d culture GATTGTTCCT GGTTAAATGT 9.4 0.0094 3T3 fibroblasts GGTTAAATGT 17.5 0.0175 Hypothalamus GAGATGAACG (2) 1.8 0.0018 E12.5 retina GATTGTTCCT GGGTTCTGTT (2) GGTTAAATGT 5.7 0.0057 E14.5 retina GGTTAAATGT 3.6 0.0036 E16.5 retina ATTTGAATTC GGTTAAATGT 9 0.009 E18.5 retina GGTTAAATGT 1.8 0.0018 P0.5 retina GATTGTTCCT GGTTAAATGT 9.9 0.0099 P2.5 retina GGGGTTCTGT GGTTAAATGT 7.1 0.0071 P4.5 retina GGTTAAATGT 4 0.004 P6.5 retina ATTTGAATTC GGTTAAATGT 10 0.01 P10.5 crx- retina ATTTGAATTC GAGATGAACG (2) GGGGTTCTGT GGGTTCTGTT (2) GGTTAAATGT 26.2 0.0262 P10.5 crx+ retina GGTTAAATGT 9.6 0.0096 Adult retinal GGTTAAATGT 5.6 0.0056 ONL GATTGTTCCT GGTTAAATGT 3.8 0.0038