Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288474	Pogz	pogo transposable element with ZNF domain	3		229584
Mm.288474	Spp1	secreted phosphoprotein 1	5	5 56.0 cM	20750
Gene Ontology	cell adhesion | cytokine activity | extracellular space | ossification | protein binding
Human Homolog	SPP1[secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 272 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCCCTCCTGA (4) 8.2 0.0082 P8 Cb GC CCCTCTGTCA (4) 8.2 0.0082 P8 Cb GC TGTGGGAACC (4) 6.5 0.0065 P8 Cb GC GGAAGGAGGG (7) 4.9 0.0049 P8 Cb GC AAGGGCTCTG (5) 3.3 0.0033 P8 Cb GC GGTGGTGCCT (7) 3.3 0.0033 P8 Cb GC AAAAGCAGTG (6) 1.6 0.0016 P8 Cb GC AAGACAAAGT (5) 1.6 0.0016 P8 Cb GC AAGTCCAAGA (6) 1.6 0.0016 P8 Cb GC AGTTCAAGTC (6) 1.6 0.0016 P8 Cb GC CAAACACCGT (6) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GGAAGGAGGG (7) 13.9 0.0139 Cb medulloblastoma CCCTCTGTCA (4) 11.6 0.0116 Cb medulloblastoma TGTGGGAACC (4) 9.2 0.0092 Cb medulloblastoma AAAAAAAAGA (7) 6.9 0.0069 Cb medulloblastoma GCCCCTTCTT (6) 6.9 0.0069 Cb medulloblastoma AATTAGAGAA (4) 4.6 0.0046 Cb medulloblastoma AAACAAAAAA (12) 2.3 0.0023 Cb medulloblastoma AAGGGCTCTG (5) 2.3 0.0023 Cb medulloblastoma CCCCTCCTGA (4) 2.3 0.0023 Cb medulloblastoma CTCACAGAGA (7) 2.3 0.0023 Cb medulloblastoma GCCCTTCTGG (11) 2.3 0.0023 Cb medulloblastoma GGTGGTGCCT (7) 2.3 0.0023 Cb medulloblastoma TAGTAGTGAA (4) 2.3 0.0023 Cb medulloblastoma TGGGGACAAA (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGTGGGAACC (4) 13.7 0.0137 P8 GC+1d culture AATTAGAGAA (4) 5.7 0.0057 P8 GC+1d culture CCCCTCCTGA (4) 5.7 0.0057 P8 GC+1d culture CCCTCTGTCA (4) 5.7 0.0057 P8 GC+1d culture CAAACACCGT (6) 4.6 0.0046 P8 GC+1d culture GCCCCTTCTT (6) 3.4 0.0034 P8 GC+1d culture GCCCTTCTGG (11) 3.4 0.0034 P8 GC+1d culture GGTGGTGCCT (7) 3.4 0.0034 P8 GC+1d culture AAAAAAAAGA (7) 2.3 0.0023 P8 GC+1d culture GGAAGGAGGG (7) 2.3 0.0023 P8 GC+1d culture AAGGGCTCTG (5) 1.1 0.0011 P8 GC+1d culture CTCACAGAGA (7) 1.1 0.0011 P8 GC+1d culture GCTCACACCT (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCCTCTGTCA (4) 9.4 0.0094 P8 GC+SHH+1d culture TGTGGGAACC (4) 8.2 0.0082 P8 GC+SHH+1d culture CCCCTCCTGA (4) 7 0.007 P8 GC+SHH+1d culture CAAACACCGT (6) 4.7 0.0047 P8 GC+SHH+1d culture CAAACACCTT (3) 4.7 0.0047 P8 GC+SHH+1d culture AAAAGCAGTG (6) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGTGCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAACAAA (15) 2.3 0.0023 P8 GC+SHH+1d culture GCCCCTTCTT (6) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture AAAAAGGGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture AATTAGAGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture ATTTATGTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture CCTCTGATCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTGGTGGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture TCTCCCTGTT (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CCCCTCCTGA (4) 14 0.014 3T3 fibroblasts CAAACACCGT (6) 10.5 0.0105 3T3 fibroblasts GGTGGTGCCT (7) 10.5 0.0105 3T3 fibroblasts CCCTCTGTCA (4) 3.5 0.0035 3T3 fibroblasts GCCCCTTCTT (6) 3.5 0.0035 3T3 fibroblasts GGAAGGAGGG (7) 3.5 0.0035 3T3 fibroblasts TGTGGGAACC (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCCCTCCTGA (4) 9.9 0.0099 E15 cortex CCCTCTGTCA (4) 9.9 0.0099 E15 cortex GGAAGGAGGG (7) 9.9 0.0099 E15 cortex AAGACAAAGT (5) 4.9 0.0049 E15 cortex GCAACACCGG (4) 4.9 0.0049 E15 cortex GCTGGTGGCT (5) 4.9 0.0049 E15 cortex TGGGGACAAA (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCCTCTGTCA (4) 9.1 0.0091 P1 cortex GCCCCTTCTT (6) 9.1 0.0091 P1 cortex AAAAGCAGTG (6) 4.5 0.0045 P1 cortex AATTAGAGAA (4) 4.5 0.0045 P1 cortex CCCCTCCTGA (4) 4.5 0.0045 P1 cortex GGAAGGAGGG (7) 4.5 0.0045 P1 cortex TCTCCCTGTT (2) 4.5 0.0045 P1 cortex TGGGGACAAA (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGTGGGAACC (4) 18.1 0.0181 Hypothalamus GCCCCTTCTT (6) 9.1 0.0091 Hypothalamus CCCTCTGTCA (4) 7.2 0.0072 Hypothalamus GCTGGTGGCT (5) 7.2 0.0072 Hypothalamus GGTGGTGCCT (7) 7.2 0.0072 Hypothalamus GGAAGGAGGG (7) 5.4 0.0054 Hypothalamus AATTAGAGAA (4) 3.6 0.0036 Hypothalamus GAATTTAAAA (12) 3.6 0.0036 Hypothalamus TAGTAGTGAA (4) 3.6 0.0036 Hypothalamus AAACAAAAAA (12) 1.8 0.0018 Hypothalamus AAGACAAAGT (5) 1.8 0.0018 Hypothalamus AATAGAGAAG (3) 1.8 0.0018 Hypothalamus CTCACAGAGA (7) 1.8 0.0018 Hypothalamus GCTGGTGCCC (2) 1.8 0.0018 Hypothalamus TCTCCCTGTT (2) 1.8 0.0018 Hypothalamus TGGGGACAAA (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCCCTCCTGA (4) 11.3 0.0113 E12.5 retina GGTGGTGCCT (7) 9.4 0.0094 E12.5 retina AATTAGAGAA (4) 7.5 0.0075 E12.5 retina GGAAGGAGGG (7) 5.6 0.0056 E12.5 retina AAAAAAAAGA (7) 1.9 0.0019 E12.5 retina AAAAAGGGGG (7) 1.9 0.0019 E12.5 retina AAACAAAAGA (8) 1.9 0.0019 E12.5 retina CAAACACCTT (3) 1.9 0.0019 E12.5 retina GCTCACACCT (4) 1.9 0.0019 E12.5 retina GCTGGTGGCT (5) 1.9 0.0019 E12.5 retina TAGTAGTGAA (4) 1.9 0.0019 E12.5 retina TGGGGACAAA (5) 1.9 0.0019 E12.5 retina TGTGGGAACC (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GCTGGTGGCT (5) 16.4 0.0164 E14.5 retina CCCCTCCTGA (4) 5.5 0.0055 E14.5 retina GGTGGTGCCT (7) 5.5 0.0055 E14.5 retina AAAAAAAAGA (7) 3.6 0.0036 E14.5 retina GGAAGGAGGG (7) 3.6 0.0036 E14.5 retina TGTGGGAACC (4) 3.6 0.0036 E14.5 retina AAACAAAAAA (12) 1.8 0.0018 E14.5 retina AAACAAAAGA (8) 1.8 0.0018 E14.5 retina AAGTCCAAGA (6) 1.8 0.0018 E14.5 retina AATAGAGAAG (3) 1.8 0.0018 E14.5 retina AGTTCAAGTC (6) 1.8 0.0018 E14.5 retina CTCACAGAGA (7) 1.8 0.0018 E14.5 retina TAGTAGTGAA (4) 1.8 0.0018 E14.5 retina TATGTAGAAA (5) 1.8 0.0018 E14.5 retina TCTCCCTGTT (2) 1.8 0.0018 E14.5 retina TGGGGACAAA (5) 1.8 0.0018 E14.5 retina TTGCTCAGGT (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GCTGGTGGCT (5) 18.1 0.0181 E16.5 retina AATAGAGAAG (3) 3.6 0.0036 E16.5 retina CCCTCTGTCA (4) 3.6 0.0036 E16.5 retina GGAAGGAGGG (7) 3.6 0.0036 E16.5 retina GGTGGTGCCT (7) 3.6 0.0036 E16.5 retina TGTGGGAACC (4) 3.6 0.0036 E16.5 retina AAAAAGGGGG (7) 1.8 0.0018 E16.5 retina AATTAGAGAA (4) 1.8 0.0018 E16.5 retina CCCCTCCTGA (4) 1.8 0.0018 E16.5 retina CTCACAGAGA (7) 1.8 0.0018 E16.5 retina GCAACACCGG (4) 1.8 0.0018 E16.5 retina GCCCCTTCTT (6) 1.8 0.0018 E16.5 retina TGGGGACAAA (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AATTAGAGAA (4) 9.1 0.0091 E18.5 retina GGAAGGAGGG (7) 9.1 0.0091 E18.5 retina CCCCTCCTGA (4) 5.5 0.0055 E18.5 retina TGTGGGAACC (4) 5.5 0.0055 E18.5 retina AAACAAAAAA (12) 3.6 0.0036 E18.5 retina CCCTCTGTCA (4) 3.6 0.0036 E18.5 retina GCCCCTTCTT (6) 3.6 0.0036 E18.5 retina TGGGGACAAA (5) 3.6 0.0036 E18.5 retina AAAAAACAAA (15) 1.8 0.0018 E18.5 retina AAACAAAAGA (8) 1.8 0.0018 E18.5 retina GAATTTAAAA (12) 1.8 0.0018 E18.5 retina GCTGGTGCCC (2) 1.8 0.0018 E18.5 retina GCTGGTGGCT (5) 1.8 0.0018 E18.5 retina GGTGGTGCCT (7) 1.8 0.0018 E18.5 retina TATGTAGAAA (5) 1.8 0.0018 E18.5 retina TCTCCCTGTT (2) 1.8 0.0018 E18.5 retina TTGCTCAGGT (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCCCTCCTGA (4) 15.7 0.0157 P0.5 retina CCCTCTGTCA (4) 9.8 0.0098 P0.5 retina GGAAGGAGGG (7) 5.9 0.0059 P0.5 retina AAAAAAAAGA (7) 3.9 0.0039 P0.5 retina AATTAGAGAA (4) 3.9 0.0039 P0.5 retina CTCACAGAGA (7) 3.9 0.0039 P0.5 retina GCCCCTTCTT (6) 3.9 0.0039 P0.5 retina TGTGGGAACC (4) 3.9 0.0039 P0.5 retina AAAAGCAGTG (6) 2 0.002 P0.5 retina AAGGGCTCTG (5) 2 0.002 P0.5 retina ATTTATGTCT (4) 2 0.002 P0.5 retina CCTCTGATCC (2) 2 0.002 P0.5 retina GCTGGTGGCT (5) 2 0.002 P0.5 retina TAGTAGTGAA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GGAAGGAGGG (7) 12.3 0.0123 P2.5 retina CCCTCTGTCA (4) 10.6 0.0106 P2.5 retina TAGTAGTGAA (4) 8.8 0.0088 P2.5 retina TGTGGGAACC (4) 7 0.007 P2.5 retina AAAAAAAAGA (7) 3.5 0.0035 P2.5 retina AAGGGCTCTG (5) 3.5 0.0035 P2.5 retina AATTAGAGAA (4) 3.5 0.0035 P2.5 retina AGTTCAAGTC (6) 3.5 0.0035 P2.5 retina AAAAAGGGGG (7) 1.8 0.0018 P2.5 retina AAACAAAAAA (12) 1.8 0.0018 P2.5 retina CAAACACCTT (3) 1.8 0.0018 P2.5 retina CCCCTCCTGA (4) 1.8 0.0018 P2.5 retina CCTCTGATCC (2) 1.8 0.0018 P2.5 retina GCCCCTTCTT (6) 1.8 0.0018 P2.5 retina GGTGGTGCCT (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GGAAGGAGGG (7) 27.7 0.0277 P4.5 retina TGTGGGAACC (4) 13.9 0.0139 P4.5 retina CCCCTCCTGA (4) 7.9 0.0079 P4.5 retina CCCTCTGTCA (4) 7.9 0.0079 P4.5 retina AAACAAAAAA (12) 2 0.002 P4.5 retina AATTAGAGAA (4) 2 0.002 P4.5 retina ATTTATGTCT (4) 2 0.002 P4.5 retina GAATTTAAAA (12) 2 0.002 P4.5 retina GCCCCTTCTT (6) 2 0.002 P4.5 retina GCTGGTGCCC (2) 2 0.002 P4.5 retina TAGTAGTGAA (4) 2 0.002 P4.5 retina TGGGGACAAA (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGAAGGAGGG (7) 15 0.015 P6.5 retina TGTGGGAACC (4) 6.7 0.0067 P6.5 retina AATTAGAGAA (4) 5 0.005 P6.5 retina CCCTCTGTCA (4) 5 0.005 P6.5 retina GCCCTTCTGG (11) 5 0.005 P6.5 retina AAACAACAAA (3) 3.3 0.0033 P6.5 retina AAAAAAAAGA (7) 1.7 0.0017 P6.5 retina AAAAAACAAA (15) 1.7 0.0017 P6.5 retina CCCCTCCTGA (4) 1.7 0.0017 P6.5 retina CCTCTGATCC (2) 1.7 0.0017 P6.5 retina GAATTTAAAA (12) 1.7 0.0017 P6.5 retina GCTCACACCT (4) 1.7 0.0017 P6.5 retina GGTGGTGCCT (7) 1.7 0.0017 P6.5 retina TAGTAGTGAA (4) 1.7 0.0017 P6.5 retina TGGGGACAAA (5) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCCCTCCTGA (4) 13 0.013 P10.5 crx- retina CCCTCTGTCA (4) 9.3 0.0093 P10.5 crx- retina TGTGGGAACC (4) 7.4 0.0074 P10.5 crx- retina GCCCTTCTGG (11) 5.6 0.0056 P10.5 crx- retina GGAAGGAGGG (7) 5.6 0.0056 P10.5 crx- retina AATTAGAGAA (4) 3.7 0.0037 P10.5 crx- retina CAAACACCGT (6) 3.7 0.0037 P10.5 crx- retina GCTGGTGGCT (5) 3.7 0.0037 P10.5 crx- retina GGTGGTGCCT (7) 3.7 0.0037 P10.5 crx- retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx- retina AAAAGCAGTG (6) 1.9 0.0019 P10.5 crx- retina AATAGAGAAG (3) 1.9 0.0019 P10.5 crx- retina ATTTATGTCT (4) 1.9 0.0019 P10.5 crx- retina CTCACAGAGA (7) 1.9 0.0019 P10.5 crx- retina GAATTTAAAA (12) 1.9 0.0019 P10.5 crx- retina GCAACACCGG (4) 1.9 0.0019 P10.5 crx- retina TAGTAGTGAA (4) 1.9 0.0019 P10.5 crx- retina TATGTAGAAA (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGAAGGAGGG (7) 19.2 0.0192 P10.5 crx+ retina CCCTCTGTCA (4) 13.5 0.0135 P10.5 crx+ retina CCCCTCCTGA (4) 9.6 0.0096 P10.5 crx+ retina TGTGGGAACC (4) 3.8 0.0038 P10.5 crx+ retina AAAAAAAAGA (7) 1.9 0.0019 P10.5 crx+ retina GCCCTTCTGG (11) 1.9 0.0019 P10.5 crx+ retina TAGTAGTGAA (4) 1.9 0.0019 P10.5 crx+ retina TCTCCCTGTT (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAAACACCGT (6) 7.4 0.0074 Adult retinal GCCCTTCTGG (11) 7.4 0.0074 Adult retinal GGAAGGAGGG (7) 7.4 0.0074 Adult retinal CCCTCTGTCA (4) 5.6 0.0056 Adult retinal AGTTCAAGTC (6) 3.7 0.0037 Adult retinal GCTGGTGGCT (5) 1.9 0.0019 Adult retinal TGTGGGAACC (4) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GGAAGGAGGG (7) 7.7 0.0077 ONL GGTGGTGCCT (7) 5.7 0.0057 ONL CCCTCTGTCA (4) 3.8 0.0038 ONL AAAAAACAAA (15) 1.9 0.0019 ONL AAGTCCAAGA (6) 1.9 0.0019 ONL AATTAGAGAA (4) 1.9 0.0019 ONL CCCCTCCTGA (4) 1.9 0.0019 ONL CCTCTGATCC (2) 1.9 0.0019 ONL GCCCTTCTGG (11) 1.9 0.0019 ONL TGTGGGAACC (4) 1.9 0.0019 ONL TTGCTCAGGT (4) 1.9 0.0019