Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288474	Pogz	pogo transposable element with ZNF domain	3		229584
Mm.288474	Spp1	secreted phosphoprotein 1	5	5 56.0 cM	20750
Gene Ontology	cell adhesion | cytokine activity | extracellular space | ossification | protein binding
Human Homolog	SPP1[secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTCAAGTC (3) CAAACACCGT (3) CCCCTCCTGA (3) 11.4 0.0114 Cb medulloblastoma AAACAAAAAA (3) CCCCTCCTGA (3) 4.6 0.0046 P8 GC+1d culture CAAACACCGT (3) CCCCTCCTGA (3) 10.3 0.0103 P8 GC+SHH+1d culture CAAACACCGT (3) CAAACACCTT (2) CCCCTCCTGA (3) CCTCTGATCC (2) GCTGGTGGCT (3) 18.8 0.0188 3T3 fibroblasts CAAACACCGT (3) CCCCTCCTGA (3) 24.5 0.0245 E15 cortex CCCCTCCTGA (3) GCTGGTGGCT (3) 14.8 0.0148 P1 cortex CCCCTCCTGA (3) 4.5 0.0045 Hypothalamus AAACAAAAAA (3) GCTGGTGCCC (2) GCTGGTGGCT (3) 10.8 0.0108 E12.5 retina AAACAAAAGA (2) CAAACACCTT (2) CCCCTCCTGA (3) GCTGGTGGCT (3) 17 0.017 E14.5 retina AAACAAAAAA (3) AAACAAAAGA (2) AGTTCAAGTC (3) CCCCTCCTGA (3) GCTGGTGGCT (3) TATGTAGAAA (4) 29.1 0.0291 E16.5 retina CCCCTCCTGA (3) GCTGGTGGCT (3) 19.9 0.0199 E18.5 retina AAACAAAAAA (3) AAACAAAAGA (2) CCCCTCCTGA (3) GCTGGTGCCC (2) GCTGGTGGCT (3) TATGTAGAAA (4) 16.3 0.0163 P0.5 retina CCCCTCCTGA (3) CCTCTGATCC (2) GCTGGTGGCT (3) 19.7 0.0197 P2.5 retina AAACAAAAAA (3) AGTTCAAGTC (3) CAAACACCTT (2) CCCCTCCTGA (3) CCTCTGATCC (2) 10.7 0.0107 P4.5 retina AAACAAAAAA (3) CCCCTCCTGA (3) GCTGGTGCCC (2) 11.9 0.0119 P6.5 retina AAACAACAAA (2) CCCCTCCTGA (3) CCTCTGATCC (2) 6.7 0.0067 P10.5 crx- retina CAAACACCGT (3) CCCCTCCTGA (3) GCTGGTGGCT (3) TATGTAGAAA (4) 22.3 0.0223 P10.5 crx+ retina CCCCTCCTGA (3) 9.6 0.0096 Adult retinal AGTTCAAGTC (3) CAAACACCGT (3) GCTGGTGGCT (3) 13 0.013 ONL CCCCTCCTGA (3) CCTCTGATCC (2) 3.8 0.0038