Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288474	Pogz	pogo transposable element with ZNF domain	3		229584
Mm.288474	Spp1	secreted phosphoprotein 1	5	5 56.0 cM	20750
Gene Ontology	cell adhesion | cytokine activity | extracellular space | ossification | protein binding
Human Homolog	SPP1[secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCTCCTGA (3) 8.2 0.0082 P8 Cb GC AGTTCAAGTC (3) 1.6 0.0016 P8 Cb GC CAAACACCGT (3) 1.6 0.0016 Cb medulloblastoma AAACAAAAAA (3) 2.3 0.0023 Cb medulloblastoma CCCCTCCTGA (3) 2.3 0.0023 P8 GC+1d culture CCCCTCCTGA (3) 5.7 0.0057 P8 GC+1d culture CAAACACCGT (3) 4.6 0.0046 P8 GC+SHH+1d culture CCCCTCCTGA (3) 7 0.007 P8 GC+SHH+1d culture CAAACACCGT (3) 4.7 0.0047 P8 GC+SHH+1d culture CAAACACCTT (2) 4.7 0.0047 P8 GC+SHH+1d culture CCTCTGATCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTGGTGGCT (3) 1.2 0.0012 3T3 fibroblasts CCCCTCCTGA (3) 14 0.014 3T3 fibroblasts CAAACACCGT (3) 10.5 0.0105 E15 cortex CCCCTCCTGA (3) 9.9 0.0099 E15 cortex GCTGGTGGCT (3) 4.9 0.0049 P1 cortex CCCCTCCTGA (3) 4.5 0.0045 Hypothalamus GCTGGTGGCT (3) 7.2 0.0072 Hypothalamus AAACAAAAAA (3) 1.8 0.0018 Hypothalamus GCTGGTGCCC (2) 1.8 0.0018 E12.5 retina CCCCTCCTGA (3) 11.3 0.0113 E12.5 retina AAACAAAAGA (2) 1.9 0.0019 E12.5 retina CAAACACCTT (2) 1.9 0.0019 E12.5 retina GCTGGTGGCT (3) 1.9 0.0019 E14.5 retina GCTGGTGGCT (3) 16.4 0.0164 E14.5 retina CCCCTCCTGA (3) 5.5 0.0055 E14.5 retina AAACAAAAAA (3) 1.8 0.0018 E14.5 retina AAACAAAAGA (2) 1.8 0.0018 E14.5 retina AGTTCAAGTC (3) 1.8 0.0018 E14.5 retina TATGTAGAAA (4) 1.8 0.0018 E16.5 retina GCTGGTGGCT (3) 18.1 0.0181 E16.5 retina CCCCTCCTGA (3) 1.8 0.0018 E18.5 retina CCCCTCCTGA (3) 5.5 0.0055 E18.5 retina AAACAAAAAA (3) 3.6 0.0036 E18.5 retina AAACAAAAGA (2) 1.8 0.0018 E18.5 retina GCTGGTGCCC (2) 1.8 0.0018 E18.5 retina GCTGGTGGCT (3) 1.8 0.0018 E18.5 retina TATGTAGAAA (4) 1.8 0.0018 P0.5 retina CCCCTCCTGA (3) 15.7 0.0157 P0.5 retina CCTCTGATCC (2) 2 0.002 P0.5 retina GCTGGTGGCT (3) 2 0.002 P2.5 retina AGTTCAAGTC (3) 3.5 0.0035 P2.5 retina AAACAAAAAA (3) 1.8 0.0018 P2.5 retina CAAACACCTT (2) 1.8 0.0018 P2.5 retina CCCCTCCTGA (3) 1.8 0.0018 P2.5 retina CCTCTGATCC (2) 1.8 0.0018 P4.5 retina CCCCTCCTGA (3) 7.9 0.0079 P4.5 retina AAACAAAAAA (3) 2 0.002 P4.5 retina GCTGGTGCCC (2) 2 0.002 P6.5 retina AAACAACAAA (2) 3.3 0.0033 P6.5 retina CCCCTCCTGA (3) 1.7 0.0017 P6.5 retina CCTCTGATCC (2) 1.7 0.0017 P10.5 crx- retina CCCCTCCTGA (3) 13 0.013 P10.5 crx- retina CAAACACCGT (3) 3.7 0.0037 P10.5 crx- retina GCTGGTGGCT (3) 3.7 0.0037 P10.5 crx- retina TATGTAGAAA (4) 1.9 0.0019 P10.5 crx+ retina CCCCTCCTGA (3) 9.6 0.0096 Adult retinal CAAACACCGT (3) 7.4 0.0074 Adult retinal AGTTCAAGTC (3) 3.7 0.0037 Adult retinal GCTGGTGGCT (3) 1.9 0.0019 ONL CCCCTCCTGA (3) 1.9 0.0019 ONL CCTCTGATCC (2) 1.9 0.0019