Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219793	Ssrp1	structure specific recognition protein 1	2	2 47.8 cM	20833
Gene Ontology	chromatin | DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	SSRP1[structure specific recognition protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGAGTATG AAGCACTTGT CCAAGTCAGG GGCAGACCTT (2) 27.7 0.0277 Cb medulloblastoma AAAGAGTATG AACCCTGCTG (2) AAGCACTTGT CCAAGTCAGG GGCAGACCTT (2) TGCGAGGCCC 25.3 0.0253 P8 GC+1d culture AACCCTGCTG (2) AAGCACTTGT CCAAGTCAGG CTGAAATATC (2) GAGTTTGGGG GCAGAGACAT GGCAGACCTT (2) TGCGAGGCCC 24.9 0.0249 P8 GC+SHH+1d culture AACCCTGCTG (2) AAGCACTTGT CCAAAGTCAG CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) 26.9 0.0269 3T3 fibroblasts AACCCTGCTG (2) CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) GTCATAGCTG (2) 63 0.063 E15 cortex CCAAGTCAGG GGCAGACCTT (2) GTCATAGCTG (2) 39.5 0.0395 P1 cortex AAAGAGTATG ACAGCAACGA CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) 40.8 0.0408 Hypothalamus AACCCTGCTG (2) ACCCCTTCTG AGCCCTGGTG CCAAGTCAGG GAGTTTGGGG GCAGAGACAT GGCAGACCTT (2) 19.8 0.0198 E12.5 retina AAAGAGTATG AAGCACTTGT CCAAGTCAGG CTGAAATATC (2) GCAGAGACAT 45.1 0.0451 E14.5 retina AAAGAGTATG AAGCACTTGT CCAAGTCAGG CTGAAATATC (2) GCAGAGACAT GGCAGACCTT (2) 27.3 0.0273 E16.5 retina AAGCACTTGT CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) GGGAAGACCT 45.3 0.0453 E18.5 retina AAAGAGTATG AAGCACTTGT CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) 23.5 0.0235 P0.5 retina AAAGAGTATG AACCCTGCTG (2) CCAAGTCAGG GGCAGACCTT (2) GTCATAGCTG (2) 53 0.053 P2.5 retina AACCCTGCTG (2) CCAAAGTCAG CCAAGTCAGG GGCAGACCTT (2) GGGAAGACCT GTCATAGCTG (2) TGCGAGGCCC 19.5 0.0195 P4.5 retina AACCCTGCTG (2) CCAAGTCAGG CTGAAATATC (2) GGCAGACCTT (2) GTCATAGCTG (2) 13.9 0.0139 P6.5 retina AAAAGCACTT AAGCACTTGT CCAAGTCAGG CTGAAATATC (2) GGCAGACCTT (2) GGGAAGACCT GTCATAGCTG (2) 25.1 0.0251 P10.5 crx- retina AAAAGCACTT AACCCTGCTG (2) AGCCCTGGTG CCAAAGTCAG CCAAGTCAGG GCAGAGACAT GGCAGACCTT (2) GGGAAGACCT 37.4 0.0374 P10.5 crx+ retina ACAGCAACGA ACCCCTTCTG AGCCCTGGTG CCAAGTCAGG CTGAAATATC (2) GAGTTTGGGG GCAGAGACAT GGCAGACCTT (2) 40.2 0.0402 Adult retinal AAAGAGTATG AACCCTGCTG (2) ACAGCAACGA CCAAGTCAGG CTGAAATATC (2) GCAGAGACAT GGCAGACCTT (2) GTCATAGCTG (2) 29.8 0.0298 ONL AAAAGCACTT AAAGAGTATG AACCCTGCTG (2) CCAAGTCAGG CTGAAATATC (2) GTCATAGCTG (2) 20.9 0.0209