Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22723	Rpl23a	ribosomal protein L23a	11		268449
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RPL23A[ribosomal protein L23a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAAATAG AGGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGGATGTCA (3) TGCCGCCATT 104.3 0.1043 Cb medulloblastoma AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGAAAACAA (2) GTGGATGTCA (3) TAAATAAAAA 332.8 0.3328 P8 GC+1d culture AAAAAAAAGA AAGAAAATAC (3) AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGCTGGTTCC GGGAAAAAAA (5) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT TGTGGAAACA (4) 106 0.106 P8 GC+SHH+1d culture AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGCTGGTTCC GGGAAAAAAA (5) GTAAGAAAAA (2) GTGAAAACAA (2) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT TGTGGAAACA (4) 150 0.15 3T3 fibroblasts AAGAAAATAG GCTGACTCCG (2) GTCATAGCTG (2) TGTGGAAACA (4) 38.5 0.0385 E15 cortex AAGAAAATAG GAAAAAAAAA (2) GTCATAGCTG (2) GTGGATGTCA (3) TGCCGCCATT TGTGGAAACA (4) 88.8 0.0888 P1 cortex AAGAAAATAC (3) AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGGATGTCA (3) TAAATAAAAA TGTGGAAACA (4) 136.2 0.1362 Hypothalamus AAGAAAATAG GAAAAAAAAA (2) GGGAAAAAAA (5) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT 139.4 0.1394 E12.5 retina AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GTGAAAACAA (2) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT TGTGGAAACA (4) 103.3 0.1033 E14.5 retina AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGAAAACAA (2) TAAATAAAAA 85.5 0.0855 E16.5 retina AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTAAGAAAAA (2) GTGAAAACAA (2) TGCCGCCATT TGTGGAAACA (4) 79.5 0.0795 E18.5 retina AAGAAAATAG AGGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGAAAACAA (2) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT 120 0.12 P0.5 retina AAAAAAAAGA AAGAAAATAC (3) AAGAAAATAG AGGAAAATAG AGTGACAGGG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTCATAGCTG (2) TGCCGCCATT 94.2 0.0942 P2.5 retina AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTCATAGCTG (2) GTGAAAACAA (2) TAAATAAAAA TGTGGAAACA (4) 147.8 0.1478 P4.5 retina AAGAAAATAG GAAAAAAAAA (2) GGGAAAAAAA (5) GTCATAGCTG (2) GTGAAAACAA (2) GTGGATGTCA (3) TAAATAAAAA TGCCGCCATT 109 0.109 P6.5 retina AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTCATAGCTG (2) GTGAAAACAA (2) TAAATAAAAA TGCCGCCATT 93.3 0.0933 P10.5 crx- retina AAAAAAAAGA AAGAAAATAG AGTGACAGGG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTAAGAAAAA (2) TAAATAAAAA TGCCGCCATT 187.7 0.1877 P10.5 crx+ retina AAAAAAAAGA AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGGAAAAAAA (5) GTGAAAACAA (2) TAAATAAAAA TGCCGCCATT 105.7 0.1057 Adult retinal AAGAAAATAG GAAAAAAAAA (2) GCTGACTCCG (2) GGCTGGTTCC GGGAAAAAAA (5) GTCATAGCTG (2) TAAATAAAAA TGCCGCCATT 67 0.067 ONL AAGAAAATAC (3) AAGAAAATAG GAAAAAAAAA (2) GGGAAAAAAA (5) GTCATAGCTG (2) TAAATAAAAA TGCCGCCATT 82.2 0.0822