Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.231450	Atxnl2	ataxin 2-like	7		233871
Gene Ontology	biological_process unknown | membrane | molecular_function unknown
Human Homolog	ATXN2L[ataxin 2-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGAGGGA (2) GGGGGCCCCC TGTTACCAGG 6.5 0.0065 Cb medulloblastoma AGTGGAGGGA (2) GTGACAAAAT TGAGTGTGTG (2) 16.1 0.0161 P8 GC+1d culture AGTGGAGGGA (2) GCACGAGCTC GGGGGCCCCC GTGACAAAAT TCCAAACTGG (2) 11.4 0.0114 P8 GC+SHH+1d culture AGTGGAGGGA (2) GAGGTCTCAG GCACGAGCTC GGGGGCCCCC GTGACAAAAT 10.7 0.0107 3T3 fibroblasts AGTGGAGGGA (2) GAGGTCTCAG GTCATAGCTG (2) TCCAAACTGG (2) TGTTACCAGG 38.5 0.0385 E15 cortex GTCATAGCTG (2) 4.9 0.0049 P1 cortex AGTGGAGGGA (2) GTGACAAAAT 9 0.009 Hypothalamus AGTGGAGGGA (2) GAGGTCTCAG GCACGAGCTC GCAGGAGTAG GGGGGCCCCC TCCAAACTGG (2) TGTTACCAGG 16.2 0.0162 E12.5 retina AGTGGAGGGA (2) GAGGTCTCAG GCACGAGCTC GTGACAAAAT TGAGTGTGTG (2) 22.6 0.0226 E14.5 retina AGTGGAGGGA (2) GCACGAGCTC GCAGGAGTAG GTGACAAAAT TGAGTGTGTG (2) 18.2 0.0182 E16.5 retina AGTGGAGGGA (2) GAAGAGCTGA (2) GAGGTCTCAG GTGACAAAAT 18 0.018 E18.5 retina AGTGGAGGGA (2) GCACGAGCTC GGGGGCCCCC GGTGGGAGGG (2) TGTTACCAGG 10.8 0.0108 P0.5 retina AGTGGAGGGA (2) GTCATAGCTG (2) TCCAAACTGG (2) TGTTACCAGG 29.4 0.0294 P2.5 retina GCACGAGCTC GGGGGCCCCC GTCATAGCTG (2) GTGACAAAAT TCCAAACTGG (2) TGTTACCAGG 14.2 0.0142 P4.5 retina GAGGTCTCAG GCACGAGCTC GGGGGCCCCC GGTGGGAGGG (2) GTCATAGCTG (2) GTGACAAAAT TGTTACCAGG 21.9 0.0219 P6.5 retina AGTGGAGGGA (2) GAAGAGCTGA (2) GAGGTCTCAG GCACGAGCTC GTCATAGCTG (2) GTGACAAAAT TCCAAACTGG (2) 21.7 0.0217 P10.5 crx- retina AGTGGAGGGA (2) GAAGAGCTGA (2) GAGGTCTCAG GGTGGGAGGG (2) GTGACAAAAT TCCAAACTGG (2) TGAGTGTGTG (2) 28 0.028 P10.5 crx+ retina AGTGGAGGGA (2) GAAGAGCTGA (2) GCACGAGCTC GTGACAAAAT TCCAAACTGG (2) TGAGTGTGTG (2) 19.1 0.0191 Adult retinal AGTGGAGGGA (2) GCACGAGCTC GGGGGCCCCC GTCATAGCTG (2) GTGACAAAAT TCCAAACTGG (2) 18.8 0.0188 ONL AGTGGAGGGA (2) GAAGAGCTGA (2) GTCATAGCTG (2) GTGACAAAAT TCCAAACTGG (2) TGTTACCAGG 17.1 0.0171