Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296366	Rai1	retinoic acid induced 1	11		19377
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent
Human Homolog	RAI1[retinoic acid induced 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TGCCAATGAC TTCAGGTGGT (2) 29.4 0.0294 Cb medulloblastoma GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 30 0.03 P8 GC+1d culture GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 28.6 0.0286 P8 GC+SHH+1d culture CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TGCCAATGAC TTCAGGTGGT (2) 29.3 0.0293 3T3 fibroblasts CTCGCTTCTG (2) TTCAGGTGGT (2) 17.5 0.0175 E15 cortex TTCAGGTGGT (2) 24.7 0.0247 P1 cortex TAAAATAAAA (2) TTCAGGTGGT (2) 22.7 0.0227 Hypothalamus GCATCTGCCC GCGCCTGCCT TAAAATAAAA (2) TTCAGGTGGT (2) 19.9 0.0199 E12.5 retina CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 35.7 0.0357 E14.5 retina CTCGCTTCTG (2) GCATCTGCCC GGATTCAGGG TAAAATAAAA (2) TGCCAATGAC TTCAGGTGGT (2) 30.8 0.0308 E16.5 retina GCATCTGCCC GCGCCTGCCT TAAAATAAAA (2) TTCAGGTGGT (2) 23.5 0.0235 E18.5 retina GCATCTGCCC GCGCCTGCCT TAAAATAAAA (2) TTCAGGTGGT (2) 23.7 0.0237 P0.5 retina CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 21.6 0.0216 P2.5 retina CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 21.1 0.0211 P4.5 retina GCATCTGCCC GGATTCAGGG TAAAATAAAA (2) TTCAGGTGGT (2) 47.6 0.0476 P6.5 retina CTCGCTTCTG (2) GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 28.4 0.0284 P10.5 crx- retina GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 20.5 0.0205 P10.5 crx+ retina GCATCTGCCC GGATTCAGGG TAAAATAAAA (2) 5.7 0.0057 Adult retinal GCATCTGCCC TTCAGGTGGT (2) 11.1 0.0111 ONL GCATCTGCCC TAAAATAAAA (2) TTCAGGTGGT (2) 11.5 0.0115