Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12145	Rbbp4	retinoblastoma binding protein 4	4	4	19646
Gene Ontology	cell cycle | chromatin remodeling | DNA repair | DNA replication | nucleus | NuRD complex | protein binding | regulation of transcription, DNA-dependent
Human Homolog	RBBP4[retinoblastoma binding protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTAACTGTG CAAGTGTGGC (3) CTGGTGGGTT GAGAGTAACA GCTGACAAGG GTGGTTCACA (2) 52.1 0.0521 Cb medulloblastoma ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) 30 0.03 P8 GC+1d culture ACTAACTGTG CAAGTGTGGC (3) GAGAGTAACA GTGGTTCACA (2) 49.1 0.0491 P8 GC+SHH+1d culture ACTAACTGTG GAGAGTAACA GTGGTTCACA (2) 70.2 0.0702 3T3 fibroblasts AAGGGTAGCT GAGAGTAACA GTGGTTCACA (2) 45.5 0.0455 E15 cortex GCTGACAAGG GTGGTTCACA (2) 14.8 0.0148 P1 cortex GAGAGTAACA GTGGTTCACA (2) 63.7 0.0637 Hypothalamus ACTAACTGTG GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 32.6 0.0326 E12.5 retina ACTAACTGTG CAAGTGTGGC (3) CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 82.8 0.0828 E14.5 retina ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 107.4 0.1074 E16.5 retina ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 90.4 0.0904 E18.5 retina ACTAACTGGG ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 123.7 0.1237 P0.5 retina AAGGGTAGCT ACTAACTGTG CAAGTGTGGC (3) GAGAGTAACA GTGGTTCACA (2) 92.2 0.0922 P2.5 retina AAGGGTAGCT ACTAACTGGG ACTAACTGTG CAAGTGTGGC (3) GAGAGTAACA GTGGTTCACA (2) 47.5 0.0475 P4.5 retina ACTAACTGTG GAGAGTAACA GTGGTTCACA (2) 73.3 0.0733 P6.5 retina ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) 40 0.04 P10.5 crx- retina ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) 61.3 0.0613 P10.5 crx+ retina ACTAACTGTG GAGAGTAACA GTGGTTCACA (2) 65.4 0.0654 Adult retinal ACTAACTGTG CTGGTGGGTT GAGAGTAACA GTGGTTCACA (2) 44.5 0.0445 ONL ACTAACTGTG GAGAGTAACA GTGGTTCACA (2) TTTATGTTTA (2) 47.9 0.0479