Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.56337	Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit	11	11 44.0 cM	18472
Gene Ontology	1-alkyl-2-acetylglycerophosphocholine esterase activity | acrosome formation | cell migration | centrosome | cytoplasm | cytoskeleton | hydrolase activity | microtubule associated complex | microtubule binding | microtubule cytoskeleton | mitosis | neuroblast proliferation | neurogenesis | neuronal migration | retrograde axon cargo transport
Human Homolog	PAFAH1B1[platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTTGGAA (4) GGCAAAATTG (2) GGTTTCCCCC (2) TAAATTATTC TAAGTAGCTG TTTTCTGCAT 21.1 0.0211 Cb medulloblastoma ACTTTTGGAA (4) ATACAGTGAA GCAGGACATT (2) GGCAAAATTG (2) GTGAATCCAA TGGTGTGACC (2) TTTTCTGCAT 41.5 0.0415 P8 GC+1d culture AATTGTTTAA ATACAGTGAA CTAAAACTGA GCAGGACATT (2) GGCAAAATTG (2) GTGAATCCAA TTTTCTGCAT 24.9 0.0249 P8 GC+SHH+1d culture GCAGGACATT (2) GGTTTCCCCC (2) GTGAATCCAA TAAATTAAAA TGGTGTGACC (2) TTTTCTGCAT 29.4 0.0294 3T3 fibroblasts GCAGGACATT (2) 3.5 0.0035 E15 cortex ACTTTTGGAA (4) GCAGGACATT (2) GTGAATCCAA TTTTCTGCAT 29.5 0.0295 P1 cortex CTAAAACTGA GCAGGACATT (2) TTTTCTGCAT 22.7 0.0227 Hypothalamus ACTTTTGGAA (4) ATACAGTGAA GATAAATTTT (2) GCAGGACATT (2) TAAATTATTC TGGGTGTGAG TTTTCTGCAT 30.8 0.0308 E12.5 retina ACTTTTGGAA (4) CTAAAACTGA GGTTTCCCCC (2) GTGAATCCAA TAAATTATTC TTTTCTGCAT 15.2 0.0152 E14.5 retina ATACAGTGAA TTTTCTGCAT 20 0.02 E16.5 retina AATTGTTTAA ATACAGTGAA GCAGGACATT (2) TTTTCTGCAT 27.1 0.0271 E18.5 retina TAAATTAAAA TAAATTATTC TTTTCTGCAT 21.8 0.0218 P0.5 retina ATACAGTGAA TTTTCTGCAT 7.9 0.0079 P2.5 retina ACTTTTGGAA (4) GTGAATCCAA TAAATTAAAA TTTTCTGCAT 16 0.016 P4.5 retina ATACAGTGAA GTGAATCCAA TAAATTAAAA TTTTCTGCAT 10 0.01 P6.5 retina ATACAGTGAA GATAAATTTT (2) GCAGGACATT (2) GTGAATCCAA TAAATTATTC TGGGTGTGAG TTTTCTGCAT 30.1 0.0301 P10.5 crx- retina ACTTTTGGAA (4) GATAAATTTT (2) GCAGGACATT (2) TAAGTAGCTG TTTTCTGCAT 46.6 0.0466 P10.5 crx+ retina AATTGTTTAA CTAAAACTGA GCAGGACATT (2) TGGTGTGACC (2) TTTTCTGCAT 26.8 0.0268 Adult retinal CTAAAACTGA GCAGGACATT (2) TAAGTAGCTG TTTTCTGCAT 14.9 0.0149 ONL CTAAAACTGA GCAGGACATT (2) TGGGTGTGAG TTTTCTGCAT 19.1 0.0191