Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.145488	D4Ertd100e	DNA segment, Chr 4, ERATO Doi 100, expressed	4	4 61.0 cM	52213
Mm.145488	Yars	tyrosyl-tRNA synthetase	4		107271
Gene Ontology	apoptosis | ATP binding | cell motility | cytoplasm | extracellular space | interleukin-8 receptor binding | ligase activity | nucleic acid binding | protein biosynthesis | RNA binding | signal transducer activity | soluble fraction | tRNA aminoacylation for protein translation | tRNA binding | tRNA ligase activity | tyrosine-tRNA ligase activity | tyrosyl-tRNA aminoacylation
Human Homolog	YARS[tyrosyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAGCTGT (3) GGGGTTTTCC (4) 3.2 0.0032 Cb medulloblastoma ACAAAGCTGT (3) ATTTGAAAAA (2) GGGGTTTTCC (4) 9.2 0.0092 P8 GC+1d culture ACAAAGCTGT (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 11.4 0.0114 P8 GC+SHH+1d culture ACAAAGCTGT (3) ATTTGAAAAA (2) GGGGTTTTCC (4) GGGTTTTCCC (3) 11.7 0.0117 3T3 fibroblasts GGGTTTTCCC (3) 3.5 0.0035 E15 cortex GGGGTTTTCC (4) GGGTTTTCCC (3) 14.8 0.0148 P1 cortex ACAAAGCTGT (3) 4.5 0.0045 Hypothalamus ACAAAGCTGT (3) ATTTGAAAAA (2) GGGGTTTTCC (4) GGGTTTTCCC (3) 10.8 0.0108 E12.5 retina GAAACTTGGG (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 7.6 0.0076 E14.5 retina ACAAAGCTGT (3) ATTTGAAAAA (2) GAAACTTGGG (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 16.4 0.0164 E16.5 retina GGGGTTTTCC (4) 1.8 0.0018 E18.5 retina GGGGTTTTCC (4) GGGTTTTCCC (3) 9.1 0.0091 P0.5 retina GGGTTTTCCC (3) 3.9 0.0039 P2.5 retina GAAACTTGGG (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 14.2 0.0142 P4.5 retina GGGGTTTTCC (4) GGGTTTTCCC (3) 4 0.004 P6.5 retina ATTTGAAAAA (2) GGGGTTTTCC (4) 3.4 0.0034 P10.5 crx- retina ACAAAGCTGT (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 5.7 0.0057 P10.5 crx+ retina ATTTGAAAAA (2) GGGGTTTTCC (4) GGGTTTTCCC (3) 7.6 0.0076 Adult retinal ACAAAGCTGT (3) GAAACTTGGG (3) GGGGTTTTCC (4) GGGTTTTCCC (3) 14.9 0.0149 ONL ACAAAGCTGT (3) GGGGTTTTCC (4) 7.6 0.0076