| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGCGAGTGA (2) CTTGCCCAGG (2) TCAACACGCA (2)
| 9.8 | 0.0098 |
| Cb medulloblastoma | AGGCCAGGGG (3) ATGCGAGTGA (2) CTTGCCCAGG (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | ATGCGAGTGA (2)
| 8 | 0.008 |
| P8 GC+SHH+1d culture | AACCCAGGTG (3) AGGCCAGGGG (3) ATGCGAGTGA (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | ATGCGAGTGA (2) TCAACACGCA (2)
| 7 | 0.007 |
| E15 cortex | ATGCGAGTGA (2)
| 4.9 | 0.0049 |
| P1 cortex | CTTGCCCAGG (2) TCAACACGCA (2)
| 9 | 0.009 |
| Hypothalamus | AACCCAGGTG (3) ATGCGAGTGA (2)
| 3.6 | 0.0036 |
| E12.5 retina | ATGCGAGTGA (2) CTTGCCCAGG (2) TCAACACGCA (2)
| 13.2 | 0.0132 |
| E14.5 retina | AACCCAGGTG (3) ATGCGAGTGA (2)
| 7.3 | 0.0073 |
| E16.5 retina | AACCCAGGTG (3) ATGCGAGTGA (2)
| 9 | 0.009 |
| E18.5 retina | AGGCCAGGGG (3) ATGCGAGTGA (2) TCAACACGCA (2)
| 18.2 | 0.0182 |
| P0.5 retina | ATGCGAGTGA (2) CTTGCCCAGG (2)
| 5.9 | 0.0059 |
| P4.5 retina | ATGCGAGTGA (2) CTTGCCCAGG (2)
| 11.9 | 0.0119 |
| P6.5 retina | AACCCAGGTG (3) ATGCGAGTGA (2)
| 5 | 0.005 |
| P10.5 crx- retina | ATGCGAGTGA (2)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | AGGCCAGGGG (3) ATGCGAGTGA (2)
| 5.7 | 0.0057 |
| Adult retinal | AGGCCAGGGG (3) ATGCGAGTGA (2)
| 3.8 | 0.0038 |
| ONL | ATGCGAGTGA (2) CTTGCCCAGG (2)
| 7.6 | 0.0076 |