Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217787	Atp6v1a1	ATPase, H+ transporting, V1 subunit A, isoform 1	16		11964
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | ion transport | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP6V1A[ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAACCTTAG TACTCTGTTG (2) TCTACACAGT 6.5 0.0065 Cb medulloblastoma CCACCCTGGC CTCAGAAAGC (2) TACTCTGTTG (2) TCTACACAGT 20.8 0.0208 P8 GC+1d culture CTCAGAAAGC (2) GTAACCTTAG TACTCTGTTG (2) TCTACACAGT 19.4 0.0194 P8 GC+SHH+1d culture CCACCCTGGC CTCAGAAAGC (2) GTAACCTTAG TACTCTGTTG (2) 7 0.007 3T3 fibroblasts TACTCTGTTG (2) TCTACACAGT 10.5 0.0105 E15 cortex CTCAGAAAGC (2) 4.9 0.0049 P1 cortex CCACCCTGGC TACTCTGTTG (2) TCTACACAGT 18.1 0.0181 Hypothalamus CCACCCTGGC CTCAGAAAGC (2) GTAACCTTAG TCTACACAGT TTACAATGTG 16.2 0.0162 E12.5 retina GTAACCTTAG TACTCTGTTG (2) 3.8 0.0038 E16.5 retina CCACCCTGGC GTAACCTTAG TACTCTGTTG (2) 5.4 0.0054 E18.5 retina GTAACCTTAG 1.8 0.0018 P0.5 retina CTCAGAAAGC (2) GTAACCTTAG TCTACACAGT 11.8 0.0118 P2.5 retina CTCAGAAAGC (2) GTAACCTTAG TCTACACAGT 14.1 0.0141 P4.5 retina CTCAGAAAGC (2) GTAACCTTAG TTACAATGTG 6 0.006 P6.5 retina CTCAGAAAGC (2) GTAACCTTAG TACTCTGTTG (2) TCTACACAGT 16.8 0.0168 P10.5 crx- retina TCTACACAGT 3.7 0.0037 P10.5 crx+ retina CTCAGAAAGC (2) GTAACCTTAG TCTACACAGT TTACAATGTG 21.2 0.0212 Adult retinal CTCAGAAAGC (2) TACTCTGTTG (2) TCTACACAGT 7.5 0.0075 ONL GTAACCTTAG 1.9 0.0019