Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219245	Scoc	short coiled-coil protein	8		56367
Human Homolog	SCOC[short coiled-coil protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) 70.2 0.0702 Cb medulloblastoma AATATAAGAG CATTTGAAAA (2) GATGGCTTAT GCTCTCCAGC (2) GGATGGCTTA (3) TAGAGACTTT 178 0.178 P8 GC+1d culture CATTTGAAAA (2) CCCATTATTC GCTCTCCAGC (2) TACTGAATGC 77.5 0.0775 P8 GC+SHH+1d culture AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) TGGATGGAGA 89 0.089 3T3 fibroblasts GCTCTCCAGC (2) 28 0.028 E15 cortex GCTCTCCAGC (2) GGATGGCTTA (3) 89.1 0.0891 P1 cortex AATATAAGAG GCTCTCCAGC (2) 68.1 0.0681 Hypothalamus AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GATGGCTTAT GCTCTCCAGC (2) GCTCTTCGGG TAGAGACTTT 103.2 0.1032 E12.5 retina CATTTGAAAA (2) GCTCTCCAGC (2) GGATGGCTTA (3) 82.7 0.0827 E14.5 retina CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) TGCACTCGTT TGGATGGAGA 98.3 0.0983 E16.5 retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GCTCTTCGGG TACTGAATGC TGGATGGAGA 130.3 0.1303 E18.5 retina AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) 143.7 0.1437 P0.5 retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC GCTCTCCAGC (2) TAGAGACTTT TGCACTCGTT 88.4 0.0884 P2.5 retina AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) GCTCTGCATC GCTTTCCAGC TCTGCTTCTA TGCACTCGTT TGGATGGAGA 104.1 0.1041 P4.5 retina AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) 85.2 0.0852 P6.5 retina AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GCTCTGCATC TGGATGGAGA 105 0.105 P10.5 crx- retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GCTCTGCATC TACTGAATGC 89.3 0.0893 P10.5 crx+ retina GCTCTCCAGC (2) GCTCTGCATC TAGAGACTTT TCTGCTTCTA TGCACTCGTT TGGATGGAGA 107.5 0.1075 Adult retinal CATTTGAAAA (2) GCTCTCCAGC (2) GCTCTTCGGG TCTGCTTCTA TGCACTCGTT 74.2 0.0742 ONL AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) GCTTTCCAGC 40.1 0.0401