Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220038	Ddx5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	11	11 63.0 cM	13207
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | intracellular | nucleic acid binding | nucleus | RNA binding | RNA helicase activity
Human Homolog	DDX5[DEAD (Asp-Glu-Ala-Asp) box polypeptide 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 180 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTGCCTTC CTAAAAAGTG GCCTCCCAAT GCCTTCCAAT GGAAATGCAG TACAACTTGG TACACATAAA TGTGTTGTGT 306.7 0.3067 Cb medulloblastoma ATGTGATTGC (4) CATTGCCTTC GCCTTCCAAT TACAACTTGG TGCAAATTTT TGTGTTGTGT 194.2 0.1942 P8 GC+1d culture ATTTTTAAGT CATTGCCTTC CCATTGAAAA CCTCCTCTAC CTAAAAAGTG GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TGCAAATTTT TGTGTTGTGT 187.2 0.1872 P8 GC+SHH+1d culture AGTGAGAAGG CATTGCCTTC CTAAAAAGTG GCCCTCCAAT GCCTCCCAAT GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TAGTTTTTTT (2) TGCAAATTTT TGTGTTGTGT TTGATTTCTT 249.6 0.2496 3T3 fibroblasts AGTGAGAAGG CCTCCTCTAC GCCTTCCAAT TGTGTTGTGT 63 0.063 E15 cortex CATTGCCTTC CCAACAGGGT GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TGTGTTGTGT 123.6 0.1236 P1 cortex CTAAAAAGTG GCCTTCCAAT GGAAATGCAG TGTGTTGTGT TTGATTTCTT 99.9 0.0999 Hypothalamus ATTTTTAAGT CATTGCCTTC CCATTGAAAA CCTCCTCTAC GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TGTGTTGTGT TTGATTTCTT 110.3 0.1103 E12.5 retina ATGTGATTGC (4) CATTGCCTTC CCAACAGGGT CTAAAAAGTG GCCTCCCAAT GCCTTCCAAT GGAAATGCAG TGTGTTGTGT TTGATTTCTT 176.6 0.1766 E14.5 retina ATTTTTAAGT CATTGCCTTC CCAACAGGGT CCATTGAAAA CCTAATTCAC GCCTTCCAAT GGATAGCCAA (2) TAGTTTTTTT (2) TGTGTTGTGT 163.9 0.1639 E16.5 retina AGTGAGAAGG CATTGCCTTC CCAACAGGGT CCATTGAAAA CTAAAAAGTG GCCCTCCAAT GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TGTGTTGTGT 146.6 0.1466 E18.5 retina ATGTGATTGC (4) CATTGCCTTC CCATTGAAAA CCTAATTCAC CTAAAAAGTG GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TGCAAATTTT TGTGTTGTGT TTGATTTCTT 298.2 0.2982 P0.5 retina CATTGCCTTC CCTCCTCTAC CTAAAAAGTG GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TACACATAAA TGTGTTGTGT 166.9 0.1669 P2.5 retina AGTGAGAAGG CATTGCCTTC CCTCCTCTAC GCCTCCCAAT GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TGCAAATTTT TGTGTTGTGT 292.2 0.2922 P4.5 retina AGTGAGAAGG CATTGCCTTC CCTCCTCTAC GCCCTCCAAT GCCTCCCAAT GCCTTCCAAT GGAAATGCAG TGCAAATTTT TGTGTTGTGT 340.9 0.3409 P6.5 retina CATTGCCTTC CCAACAGGGT GCCTTCCAAT GGAAATGCAG TGCAAATTTT TGTACACATA TGTGTTGTGT 268.5 0.2685 P10.5 crx- retina AGTGAGAAGG ATGTGATTGC (4) CATTGCCTTC GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TGTGTTGTGT TTGATTTCTT 94.9 0.0949 P10.5 crx+ retina ATGTGATTGC (4) CATTGCCTTC CCTCCTCTAC CTAAAAAGTG GCCTCCCAAT GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TGCAAATTTT TGTGTTGTGT TTGATTTCTT 228.5 0.2285 Adult retinal ATTTTTAAGT CATTGCCTTC CCAACAGGGT CCATTGAAAA CCTCCTCTAC CTAAAAAGTG GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TGCAAATTTT TGTGTTGTGT 216.8 0.2168 ONL CATTGCCTTC CCTAATTCAC CCTCCTCTAC GCCTTCCAAT GGAAATGCAG GGATAGCCAA (2) TACAACTTGG TACACATAAA TGCAAATTTT TGTACACATA TGTGTTGTGT 203 0.203