Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22130	2610007O09Rik	RIKEN cDNA 2610007O09 gene	2		66579
Mm.22130	Rpn2	ribophorin II	2	2 91.0 cM	20014
Mm.22130	Rpn2-rs1	ribophorin 2, related sequence 1	7	7 66.0 cM	20015
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTTACATC (5) CTTGGGCCCA (3) TTTGGGCCCA (4) 14.6 0.0146 Cb medulloblastoma CAGTTACATC (5) GTGTGAAAGG (4) TAAGCACAGC (3) TTTGGGCCCA (4) 16.1 0.0161 P8 GC+1d culture CAGTTACATC (5) TAAGCACAGC (3) TAAGCACAGG (5) TTTGGGCCCA (4) 19.3 0.0193 P8 GC+SHH+1d culture CAGTTACATC (5) TTTGGGCCCA (4) 17.6 0.0176 3T3 fibroblasts CAGTTACATC (5) GTGTGAAAGG (4) TTGGGCCCAG (4) TTTGGGCCCA (4) 21 0.021 E15 cortex GTGTGAAAGG (4) TTTGGGCCCA (4) 14.8 0.0148 P1 cortex GTGTGAAAGG (4) TAAGCACAGG (5) TTTGGGCCCA (4) 13.5 0.0135 Hypothalamus CAACACCAAT (3) CAGTTACATC (5) TTTGGGCCCA (4) 12.6 0.0126 E12.5 retina CAGTTACATC (5) TAAGCACAGC (3) TTTGGGCCCA (4) 22.5 0.0225 E14.5 retina ATTTTGGAAT (4) CAGTTACATC (5) TAAGCACAGC (3) TTTGGGCCCA (4) 16.4 0.0164 E16.5 retina ATTTTGGAAT (4) CAGTTACATC (5) TAAGCACAGC (3) TAAGCACAGG (5) TTTGGGCCCA (4) 30.8 0.0308 E18.5 retina CAGTTACATC (5) GTGTGAAAGG (4) TAAGCACAGC (3) TTTGGGCCCA (4) 23.7 0.0237 P0.5 retina CAGTTACATC (5) TAAGCACAGG (5) TTTGGGCCCA (4) 25.5 0.0255 P2.5 retina CAGTTACATC (5) TAAGCACAGG (5) TTTGGGCCCA (4) 21.2 0.0212 P4.5 retina CAGTTACATC (5) CTTGGGCCCA (3) TTTGGGCCCA (4) 25.8 0.0258 P6.5 retina CAACACCAAT (3) CAGTTACATC (5) GTGTGAAAGG (4) TTTGGGCCCA (4) 21.6 0.0216 P10.5 crx- retina ATTTTGGAAT (4) CAGTTACATC (5) TTTGGGCCCA (4) 16.8 0.0168 P10.5 crx+ retina ATTTTGGAAT (4) CAGTTACATC (5) GTGTGAAAGG (4) TAAGCACAGG (5) TTTGGGCCCA (4) 25 0.025 Adult retinal CAGTTACATC (5) CTTGGGCCCA (3) TAAGCACAGG (5) TTGGGCCCAG (4) TTTGGGCCCA (4) 18.7 0.0187 ONL CAACACCAAT (3) TAAGCACAGG (5) TTTGGGCCCA (4) 9.5 0.0095