Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27330	Smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	11		57376
Mm.27330	5830412H02Rik	RIKEN cDNA 5830412H02 gene	11		74752
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTCAACCC (3) GAGGTGGAAG (2) TGAGCATACT (2) 11.4 0.0114 Cb medulloblastoma TGAGCATACT (2) 6.9 0.0069 P8 GC+1d culture CTGTCAACCC (3) GAGGTGGAAG (2) GATGAACAGC (2) GATGAACGGC (2) TGAGCATACT (2) TTGTATCAAC (2) 21.6 0.0216 P8 GC+SHH+1d culture CTGTCAACCC (3) GAGGTGGAAG (2) GATGAACAGC (2) TGAGCATACT (2) TTGTATCAAC (2) 31.6 0.0316 3T3 fibroblasts CTGTCAACCC (3) GAGGTGGAAG (2) TGAGCATACT (2) 10.5 0.0105 E15 cortex GAGGTGGAAG (2) TGAGCATACT (2) 14.8 0.0148 P1 cortex TGAGCATACT (2) 22.7 0.0227 Hypothalamus GAGGTGGAAG (2) TGAGCATACT (2) TTGTATCAAC (2) 7.2 0.0072 E12.5 retina CTGTCAACCC (3) GAGGTGGAAG (2) GATGAACAGC (2) TGAGCATACT (2) TTGTATCAAC (2) 30 0.03 E14.5 retina CTGTCAACCC (3) GATGAACAGC (2) TGAGCATACT (2) TTGTATCAAC (2) 16.3 0.0163 E16.5 retina CTGTCAACCC (3) GAGGTGGAAG (2) GATGAACAGC (2) TGAGCATACT (2) 19.9 0.0199 E18.5 retina CTGTCAACCC (3) GAGGTGGAAG (2) TGAGCATACT (2) 16.4 0.0164 P0.5 retina CTGTCAACCC (3) GAGGTGGAAG (2) TGAGCATACT (2) 25.5 0.0255 P2.5 retina GAGGTGGAAG (2) GATGAACAGC (2) TGAGCATACT (2) 19.4 0.0194 P4.5 retina CTGTCAACCC (3) GAGGTGGAAG (2) TGAGCATACT (2) 13.9 0.0139 P6.5 retina GAGGTGGAAG (2) TGAGCATACT (2) 11.6 0.0116 P10.5 crx- retina CTGTCAACCC (3) TGAGCATACT (2) 13 0.013 P10.5 crx+ retina GATGAACGGC (2) TGAGCATACT (2) TTGTATCAAC (2) 15.3 0.0153 Adult retinal GAGGTGGAAG (2) TGAGCATACT (2) 5.6 0.0056