Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291928	Catnb	catenin beta	9	9 F4 (9 72.0 cM)	12387
Gene Ontology	adherens junction | alpha-catenin binding | apical part of cell | basolateral plasma membrane | cadherin binding | cell adhesion | cell growth and/or maintenance | cell-cell adherens junction | cytoplasm | cytoskeleton | DNA binding | ectoderm development | gastrulation (sensu Mammalia) | heart development | hemopoiesis | intercellular junction | lamellipodium | lung development | membrane | membrane fraction | nucleus | patterning of blood vessels | protein binding | proximal/distal pattern formation | regulation of cell differentiation | regulation of cell proliferation | regulation of transcription | regulation of transcription, DNA-dependent | structural molecule activity | synapse organization and biogenesis | synaptic transmission | transcription | transcription coactivator activity | transcription factor activity | transcription factor complex | Wnt receptor signaling pathway
Human Homolog	CTNNB1[catenin (cadherin-associated protein), beta 1, 88kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAGATCC GATGGGCTGC TTTTTGAACA 16.3 0.0163 Cb medulloblastoma AAATAGATCC TTTTTGAACA 13.9 0.0139 P8 GC+1d culture TGTGGAAGTT (2) TTTTTGAACA 19.4 0.0194 P8 GC+SHH+1d culture AAATAGATCC TGTGGAAGTT (2) TTTTTGAACA 18.8 0.0188 3T3 fibroblasts AAATAGATCC TTTTTGAACA 7 0.007 E15 cortex GATGGGCTGC 4.9 0.0049 P1 cortex TTTTTGAACA 9.1 0.0091 Hypothalamus AAATAGATCC TGTGGAAGTT (2) TTTTTGAACA 16.3 0.0163 E12.5 retina AAATAGATCC TTTTTGAACA 41.3 0.0413 E14.5 retina AAATAGATCC TTTTTGAACA 23.7 0.0237 E16.5 retina AAATAGATCC GATGGGCTGC TGTGGAAGTT (2) TTTTTGAACA 18.1 0.0181 E18.5 retina AAATAGATCC GATGGGCTGC TTTTTGAACA 21.9 0.0219 P0.5 retina AAATAGATCC TGTGGAAGTT (2) TTTTTGAACA 31.5 0.0315 P2.5 retina AAATAGATCC TTTTTGAACA 28.2 0.0282 P4.5 retina AAATAGATCC TTTTTGAACA 11.9 0.0119 P6.5 retina AAATAGATCC TTTTTGAACA 15 0.015 P10.5 crx- retina TTTTTGAACA 16.7 0.0167 P10.5 crx+ retina AAATAGATCC TGTGGAAGTT (2) TTTTTGAACA 21.1 0.0211 Adult retinal TTTTTGAACA 5.6 0.0056 ONL TGTGGAAGTT (2) TTTTTGAACA 7.6 0.0076