Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298728	Nisch	nischarin	14		64652
Gene Ontology	actin cytoskeleton organization and biogenesis | cytosol | integrin binding | negative regulation of cell migration | RAC protein signal transduction | receptor activity
Human Homolog	NISCH[nischarin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGATCTGACA AGTTCAAGGC (2) GCAAGCACTG (2) GGTCCAAGAG GTGGCGCCTG TCAGGATTCA 32.6 0.0326 Cb medulloblastoma GCAAGCACTG (2) GGGAGTGTCA (3) GGTCCAAGAG 32.3 0.0323 P8 GC+1d culture AGTTCAAGGC (2) GGTCCAAGAG 29.6 0.0296 P8 GC+SHH+1d culture AGATCTGACA AGTTCAAGGC (2) CACTCACACA (2) CCCAAAAAAA (2) GGTCCAAGAG 45.7 0.0457 3T3 fibroblasts AGATCTGACA GGTCCAAGAG 31.5 0.0315 E15 cortex AGTTCAAGGC (2) CACTCACACA (2) CCCAAAAAAA (2) GGTCCAAGAG GTGGCGCCTG TCAGGATTCA 44.3 0.0443 P1 cortex AGTTCAAGGC (2) GGTCCAAGAG 13.6 0.0136 Hypothalamus AAAGCAGAAC (2) CCACTTCAGA GGTCCAAGAG 16.3 0.0163 E12.5 retina AGATCTGACA AGTTCAAGGC (2) CACTCACACA (2) GGTCCAAGAG 62 0.062 E14.5 retina AAAGCAGAAC (2) GGTCCAAGAG 29.1 0.0291 E16.5 retina AGTTCAAGGC (2) CCACTTCAGA CCCAAAAAAA (2) GCAAGCACTG (2) GGTCCAAGAG 32.5 0.0325 E18.5 retina AGATCTGACA AGTTCAAGGC (2) CCCAAAAAAA (2) GGTCCAAGAG 27.2 0.0272 P0.5 retina AGATCTGACA AGTTCAAGGC (2) CACTCACACA (2) CCCAAAAAAA (2) GGGAGTGTCA (3) GGTCCAAGAG GTGGCGCCTG TCAGGATTCA 39.5 0.0395 P2.5 retina AGTTCAAGGC (2) CCCAAAAAAA (2) GGTCCAAGAG 65.1 0.0651 P4.5 retina AGTTCAAGGC (2) CCACTTCAGA CCCAAAAAAA (2) GGTCCAAGAG 63.5 0.0635 P6.5 retina AGTTCAAGGC (2) CCCAAAAAAA (2) GGTCCAAGAG GTGGCGCCTG 50 0.05 P10.5 crx- retina GGTCCAAGAG 26 0.026 P10.5 crx+ retina GGGAGTGTCA (3) GGTCCAAGAG 34.6 0.0346 Adult retinal AAAGCAGAAC (2) CCCAAAAAAA (2) GGTCCAAGAG 37.1 0.0371 ONL AAAGCAGAAC (2) AGTTCAAGGC (2) CACTCACACA (2) CCCAAAAAAA (2) GGTCCAAGAG TCAGGATTCA 26.7 0.0267