Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.345134	Bscl2	Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	19	19 4.0 cM	14705
Gene Ontology	integral to membrane
Human Homolog	BSCL2[Bernardinelli-Seip congenital lipodystrophy 2 (seipin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAATC AGGGAATCTG GAGCCTGTAA (4) TGGTGTTTGT (5) 13 0.013 Cb medulloblastoma AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC TGGTGTTTGT (5) 13.8 0.0138 P8 GC+1d culture ACCTGCGCCT AGGGAATCTG GAGAGGAGGA (3) GAGCCTGTAA (4) 22.7 0.0227 P8 GC+SHH+1d culture AAGCTGAATC AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC GGTCAGAGAG 24.5 0.0245 3T3 fibroblasts ACCTGCGCCT AGGGAATCTG GAGCCTGTAA (4) TTGTGGTAGG 24.5 0.0245 E15 cortex AGGGAATCTG GAGAGGAGGA (3) GAGCCTGTAA (4) 24.7 0.0247 P1 cortex ACCTGCGCCT AGGGAATCTG GAGCCTGTAA (4) GGTCAGAGAG TTGTGGTAGG 27.1 0.0271 Hypothalamus GCTGGGGTAC GGTCAGAGAG 3.6 0.0036 E12.5 retina AACTGATCTT AGGGAATCTG CCACTTAACT 9.4 0.0094 E14.5 retina AACTGATCTT AGGGAATCTG CCACTTAACT GAGAGGAGGA (3) 9 0.009 E16.5 retina AACTGATCTT AGGGAATCTG GCTGGGGTAC 9 0.009 E18.5 retina AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC GGTCAGAGAG 14.5 0.0145 P0.5 retina ACCTGCGCCT AGGGAATCTG GAGCCTGTAA (4) GCCAAGGGTA (3) GCTGGGGTAC GGTCAGAGAG 21.7 0.0217 P2.5 retina AAGCTGAATC AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC TGGTGTTTGT (5) 22.9 0.0229 P4.5 retina AGGGAATCTG GAGCCTGTAA (4) GCCAAGGGTA (3) 19.8 0.0198 P6.5 retina AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC 13.4 0.0134 P10.5 crx- retina AGGGAATCTG GAGCCTGTAA (4) GCTGGGGTAC 7.5 0.0075 P10.5 crx+ retina AAGCTGAATC GAGCCTGTAA (4) 7.7 0.0077 Adult retinal ACCTGCGCCT AGGGAATCTG CCACTTAACT GAGCCTGTAA (4) 9.4 0.0094 ONL AAGCTGAATC AGGGAATCTG CCACTTAACT GAGCCTGTAA (4) GCCAAGGGTA (3) GCTGGGGTAC 38.2 0.0382