Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279751	Smarcb1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	10		20587
Gene Ontology	chromatin remodeling | nuclear chromosome | nucleus | regulation of transcription, DNA-dependent
Human Homolog	SMARCB1[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACTTTTTA TACCACCACG TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 19.5 0.0195 Cb medulloblastoma GCGGCGGGGG GTACTTTTTA TCAGAGACAA TGTTTTTTGT (3) TTCAAAAAAA (2) 53.1 0.0531 P8 GC+1d culture TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 17.2 0.0172 P8 GC+SHH+1d culture TCAGAGACAA TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 38.7 0.0387 E15 cortex TTCAAAAAAA (2) 29.7 0.0297 P1 cortex TTCAAAAAAA (2) TTCAATTTCA TTTGACTTTT (3) 13.5 0.0135 Hypothalamus TACCACCACG TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 23.5 0.0235 E12.5 retina TTCAAAAAAA (2) 9.4 0.0094 E14.5 retina GCGGCGGGGG TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA TTTGACTTTT (3) 36.3 0.0363 E16.5 retina GCGGCGGGGG GTACTTTTTA TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 16.3 0.0163 E18.5 retina GCGGCGGGGG GTACTTTTTA TTCAAAAAAA (2) 40 0.04 P0.5 retina GCGGCGGGGG TCAGAGACAA TGTTTTTTGT (3) TTCAAAAAAA (2) TTTGACTTTT (3) 19.7 0.0197 P2.5 retina TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 14.1 0.0141 P4.5 retina TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 37.7 0.0377 P6.5 retina TGTTTTTTGT (3) TTCAAAAAAA (2) TTCAATTTCA 13.3 0.0133 P10.5 crx- retina TGTTTTTTGT (3) TTCAAAAAAA (2) 9.3 0.0093 P10.5 crx+ retina TGTTTTTTGT (3) TTCAAAAAAA (2) TTTGACTTTT (3) 13.4 0.0134 Adult retinal TGTTTTTTGT (3) TTCAAAAAAA (2) 7.5 0.0075 ONL TACCACCACG TGTTTTTTGT (3) TTCAAAAAAA (2) 7.6 0.0076