Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287985	BC005655	cDNA sequence BC005655	17		212871
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 190 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAGAAAAAAA (27) 9.8 0.0098 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC AACAAAAAAA (18) 4.9 0.0049 P8 Cb GC AAAAAAAAAG (19) 3.3 0.0033 P8 Cb GC AAAAAAGAAA (12) 3.3 0.0033 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC AAAACAAAAA (22) 1.6 0.0016 P8 Cb GC AAAACAAAAC (12) 1.6 0.0016 P8 Cb GC AACAAACAAA (8) 1.6 0.0016 P8 Cb GC GAAAGAAAAA (9) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma AAAAAAAAAG (19) 13.9 0.0139 Cb medulloblastoma AAGAAAAAAA (27) 11.6 0.0116 Cb medulloblastoma AACAAAAAAA (18) 9.2 0.0092 Cb medulloblastoma AAAAAAGAAA (12) 6.9 0.0069 Cb medulloblastoma ACCACAAAAA (2) 6.9 0.0069 Cb medulloblastoma GAAAGAAAAA (9) 6.9 0.0069 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma ACAAAACCAA (6) 4.6 0.0046 Cb medulloblastoma AAAAAAAACA (13) 2.3 0.0023 Cb medulloblastoma AAAACAAAAA (22) 2.3 0.0023 Cb medulloblastoma AACAAACAAA (8) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture AACAAACAAA (8) 8 0.008 P8 GC+1d culture AAGAAAAAAA (27) 4.6 0.0046 P8 GC+1d culture AAAACAAAAA (22) 3.4 0.0034 P8 GC+1d culture AACAAAAAAA (18) 3.4 0.0034 P8 GC+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture AAAAAAAAAG (19) 1.1 0.0011 P8 GC+1d culture ACAACAAAAA (8) 1.1 0.0011 P8 GC+1d culture GAATAAATAC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture AAAAAAAAAG (19) 5.9 0.0059 P8 GC+SHH+1d culture AACAAAAAAA (18) 5.9 0.0059 P8 GC+SHH+1d culture AACAAACAAA (8) 5.9 0.0059 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture AAGAAAAAAA (27) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture AAAACAAAAA (22) 2.3 0.0023 P8 GC+SHH+1d culture GAAAGAAAAA (9) 2.3 0.0023 P8 GC+SHH+1d culture ACAAAACCAA (6) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAAACA (9) 1.2 0.0012 P8 GC+SHH+1d culture GAATAAATAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTGAGGG (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGGCTGAGGG (6) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AAGAAAAAAA (27) 24.7 0.0247 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex AAAAACAAAA (12) 4.9 0.0049 E15 cortex AACAAAAAAA (18) 4.9 0.0049 E15 cortex ACAAAACCAA (6) 4.9 0.0049 E15 cortex TGGCTGAGGG (6) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex AAAAAAAAAG (19) 9.1 0.0091 P1 cortex AAGAAAAAAA (27) 9.1 0.0091 P1 cortex AAAAACAAAA (12) 4.5 0.0045 P1 cortex AACAAACAAA (8) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AAAAAAAAAG (19) 5.4 0.0054 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus AACAAACAAA (8) 3.6 0.0036 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus AAAACAAAAA (22) 1.8 0.0018 Hypothalamus AACAAAAAAA (18) 1.8 0.0018 Hypothalamus AAGAAAAAAA (27) 1.8 0.0018 Hypothalamus ACAAAACCAA (6) 1.8 0.0018 Hypothalamus ACAACAAAAA (8) 1.8 0.0018 Hypothalamus GAAAGAAAAA (9) 1.8 0.0018 Hypothalamus TCAAATAAAG 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina AACAAAAAAA (18) 3.8 0.0038 E12.5 retina AACAAACAAA (8) 1.9 0.0019 E12.5 retina AAGAAAAAAA (27) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ACAAAACCAA (6) 20 0.02 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E14.5 retina AACAAAAAAA (18) 1.8 0.0018 E14.5 retina AACACAAAAT (4) 1.8 0.0018 E14.5 retina AAGAAAAAAA (27) 1.8 0.0018 E14.5 retina GAAAAAAACA (9) 1.8 0.0018 E14.5 retina TCAAATAAAG 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AACAAACAAA (8) 5.4 0.0054 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina AAAAAAAACA (13) 1.8 0.0018 E16.5 retina AACACAAAAT (4) 1.8 0.0018 E16.5 retina AAGAAAAAAA (27) 1.8 0.0018 E16.5 retina ACAAAACCAA (6) 1.8 0.0018 E16.5 retina GAAAGAAAAA (9) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AAAAAAAAAG (19) 5.5 0.0055 E18.5 retina AACAAAAAAA (18) 5.5 0.0055 E18.5 retina AAGAAAAAAA (27) 5.5 0.0055 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina AACAAACAAA (8) 3.6 0.0036 E18.5 retina GAAAGAAAAA (9) 3.6 0.0036 E18.5 retina AAAAAAAACA (13) 1.8 0.0018 E18.5 retina ACAAAACCAA (6) 1.8 0.0018 E18.5 retina ACAACAAAAA (8) 1.8 0.0018 E18.5 retina GAAAAAAACA (9) 1.8 0.0018 E18.5 retina GAATAAATAC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AACAAACAAA (8) 3.9 0.0039 P0.5 retina AAAAACAAAA (12) 2 0.002 P0.5 retina AAAACAAAAC (12) 2 0.002 P0.5 retina AACAAAAAAA (18) 2 0.002 P0.5 retina AAGAAAAAAA (27) 2 0.002 P0.5 retina TGGCTGAGGG (6) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AACAAACAAA (8) 10.6 0.0106 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina AAGAAAAAAA (27) 5.3 0.0053 P2.5 retina AAAAAAAAAG (19) 3.5 0.0035 P2.5 retina AAAAAAGAAA (12) 3.5 0.0035 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina AACAAAAAAA (18) 3.5 0.0035 P2.5 retina ACAACAAAAA (8) 1.8 0.0018 P2.5 retina GAAAGAAAAA (9) 1.8 0.0018 P2.5 retina TGGCTGAGGG (6) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAAAAAAAG (19) 13.9 0.0139 P4.5 retina AACAAACAAA (8) 9.9 0.0099 P4.5 retina AAGAAAAAAA (27) 5.9 0.0059 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina AACAAAAAAA (18) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P4.5 retina AAAAAAAACA (13) 2 0.002 P4.5 retina AAAAAAGAAA (12) 2 0.002 P4.5 retina GAATAAATAC (2) 2 0.002 P4.5 retina TGGCTGAGGG (6) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AACAAACAAA (8) 10 0.01 P6.5 retina AAAAAAAAAG (19) 8.3 0.0083 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina AAGAAAAAAA (27) 3.3 0.0033 P6.5 retina AAAAAAGAAA (12) 1.7 0.0017 P6.5 retina AAAACAAAAA (22) 1.7 0.0017 P6.5 retina AAAACAAAAC (12) 1.7 0.0017 P6.5 retina ACAAAACCAA (6) 1.7 0.0017 P6.5 retina ATGATGGACG (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AACAAAAAAA (18) 3.7 0.0037 P10.5 crx- retina AACAAACAAA (8) 3.7 0.0037 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina AAAAAAAAAG (19) 1.9 0.0019 P10.5 crx- retina AAAAAAGAAA (12) 1.9 0.0019 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx- retina AAAACAAAAA (22) 1.9 0.0019 P10.5 crx- retina AAAACAAAAC (12) 1.9 0.0019 P10.5 crx- retina AAGAAAAAAA (27) 1.9 0.0019 P10.5 crx- retina ACAACAAAAA (8) 1.9 0.0019 P10.5 crx- retina GAAAGAAAAA (9) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AAAAAAAAAG (19) 7.7 0.0077 P10.5 crx+ retina AAAAAAAACA (13) 1.9 0.0019 P10.5 crx+ retina AACAAAAAAA (18) 1.9 0.0019 P10.5 crx+ retina AACAAACAAA (8) 1.9 0.0019 P10.5 crx+ retina AACACAAAAT (4) 1.9 0.0019 P10.5 crx+ retina AAGAAAAAAA (27) 1.9 0.0019 P10.5 crx+ retina GAAAGAAAAA (9) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ACAAAACCAA (6) 9.3 0.0093 Adult retinal AAAAAAAAAG (19) 1.9 0.0019 Adult retinal AAAAACAAAA (12) 1.9 0.0019 Adult retinal AAAACAAAAA (22) 1.9 0.0019 Adult retinal AAGAAAAAAA (27) 1.9 0.0019 Adult retinal ACCACAAAAA (2) 1.9 0.0019 Adult retinal TCAAATAAAG 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ACAAAACCAA (6) 49.8 0.0498 ONL AAAACAAAAA (22) 7.7 0.0077 ONL AAAAAAGAAA (12) 3.8 0.0038 ONL AAAAACAAAA (12) 3.8 0.0038 ONL AACAAACAAA (8) 3.8 0.0038 ONL AAGAAAAAAA (27) 3.8 0.0038 ONL AAAAAAAAAG (19) 1.9 0.0019 ONL AAAAAAAACA (13) 1.9 0.0019 ONL AACACAAAAT (4) 1.9 0.0019 ONL ACCACAAAAA (2) 1.9 0.0019 ONL ATGATGGACG (3) 1.9 0.0019